RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 LGR4Q9BXB1 951 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 NHEJ1Q9H9Q4 299 aaPredicted RBP13.19□□□□□ -0.3
H3F3B-213ENST00000593254 MRPL40Q9NQ50 206 aaKnown RBP13.19□□□□□ -0.3
H3F3B-213ENST00000593254 SPTLC3Q9NUV7 552 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 DTLQ9NZJ0 730 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 PADI4Q9UM07 663 aa13.19□□□□□ -0.3
H3F3B-213ENST00000593254 SCN8AQ9UQD0 1980 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 ZNF487B1APH4 448 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 PDE2AO00408 941 aaPredicted RBP13.18□□□□□ -0.3
H3F3B-213ENST00000593254 ITGA2BP08514 1039 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 MYCLP1P12525 358 aaPredicted RBP13.18□□□□□ -0.3
H3F3B-213ENST00000593254 MX2P20592 715 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 CES1P23141 567 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 KDELR1P24390 212 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 ETV3P41162 512 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 ARHGAP25P42331 645 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 PDX1P52945 283 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 NFKB2Q00653 900 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 ITKQ08881 620 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 SLC10A2Q12908 348 aaPredicted RBP13.18□□□□□ -0.3
H3F3B-213ENST00000593254 PTPRRQ15256 657 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 TCEA2Q15560 299 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 DENND2CQ68D51 928 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 CRTC1Q6UUV9 634 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 ZNF574Q6ZN55 896 aaPredicted RBP13.18□□□□□ -0.3
H3F3B-213ENST00000593254 TSPAN33Q86UF1 283 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 VSIG1Q86XK7 387 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 CNGA4Q8IV77 575 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 RHOT2Q8IXI1 618 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 WDR36Q8NI36 951 aaKnown RBP13.18□□□□□ -0.3
H3F3B-213ENST00000593254 WDR48Q8TAF3 677 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 HDAC11Q96DB2 347 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 RNF157Q96PX1 679 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 CCDC3Q9BQI4 270 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 TDRD1Q9BXT4 1180 aaKnown RBP13.18□□□□□ -0.3
H3F3B-213ENST00000593254 TEX101Q9BY14 249 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 RBM22Q9NW64 420 aaKnown RBP eCLIP13.18□□□□□ -0.3
H3F3B-213ENST00000593254 SIRPGQ9P1W8 387 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 GULP1Q9UBP9 304 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 GPR34Q9UPC5 381 aa13.18□□□□□ -0.3
H3F3B-213ENST00000593254 A0A0J9YYE9 177 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 PRSS38A1L453 326 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 LRRD1A4D1F6 860 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 C3orf70A6NLC5 250 aaPredicted RBP13.17□□□□□ -0.3
H3F3B-213ENST00000593254 NTN3O00634 580 aaPredicted RBP13.17□□□□□ -0.3
H3F3B-213ENST00000593254 CASC3O15234 703 aaKnown RBP13.17□□□□□ -0.3
H3F3B-213ENST00000593254 TNFSF15O95150 251 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 TRBC1P01850 177 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 ITGB2P05107 769 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 HLA-DQB2P05538 268 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 CCNB1P14635 433 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 CTPS1P17812 591 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 TEAD1P28347 426 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 DSC2Q02487 901 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 TBX2Q13207 712 aaPredicted RBP13.17□□□□□ -0.3
H3F3B-213ENST00000593254 ARHGEF7Q14155 803 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 Q6ZVL8 140 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 TECPR1Q7Z6L1 1165 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 HEATR4Q86WZ0 1026 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 PLD5Q8N7P1 536 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 GPR156Q8NFN8 814 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 ARRDC2Q8TBH0 407 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 LRRN4Q8WUT4 740 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 TMEM168Q9H0V1 697 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 CYP4F12Q9HCS2 524 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 PHPT1Q9NRX4 125 aaPredicted RBP13.17□□□□□ -0.3
H3F3B-213ENST00000593254 HAUS2Q9NVX0 235 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 ANKMY1Q9P2S6 941 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 INTUQ9ULD6 942 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 TTLL3Q9Y4R7 772 aa13.17□□□□□ -0.3
H3F3B-213ENST00000593254 A0A0U1RQS6 177 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 NOBOXO60393 691 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 PRLP01236 227 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 CEACAM5P06731 702 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 ZNF30P17039 623 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 CDK3Q00526 305 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 DPTQ07507 201 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 PPIDQ08752 370 aaKnown RBP13.16□□□□□ -0.3
H3F3B-213ENST00000593254 NIPAL4Q0D2K0 466 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 SPIDRQ14159 915 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 TCEAL1Q15170 157 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 LRRC38Q5VT99 294 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 LRRC66Q68CR7 880 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 SLC9A4Q6AI14 798 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 OGFOD3Q6PK18 319 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 SARM1Q6SZW1 724 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 TAF8Q7Z7C8 310 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 CCDC13Q8IYE1 715 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 OR6C4Q8NGE1 309 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 EXTL1Q92935 676 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 CCDC74AQ96AQ1 378 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 SGF29Q96ES7 293 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 ZNF830Q96NB3 372 aaPredicted RBP13.16□□□□□ -0.3
H3F3B-213ENST00000593254 SMIM14Q96QK8 99 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
H3F3B-213ENST00000593254 ACSL6Q9UKU0 697 aa13.16□□□□□ -0.3
H3F3B-213ENST00000593254 CHKBQ9Y259 395 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms