RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 PSKH2Q96QS6 385 aa11.16□□□□□ -0.62
PRKCSH-220ENST00000593104 OR2M4Q96R27 311 aa11.16□□□□□ -0.62
PRKCSH-220ENST00000593104 SYT11Q9BT88 431 aa11.16□□□□□ -0.62
PRKCSH-220ENST00000593104 TRNAU1APQ9NX07 287 aaKnown RBP11.16□□□□□ -0.62
PRKCSH-220ENST00000593104 SEPT3Q9UH03 358 aa11.16□□□□□ -0.62
PRKCSH-220ENST00000593104 PLAAQ9Y263 795 aa11.16□□□□□ -0.62
PRKCSH-220ENST00000593104 SLC17A4Q9Y2C5 497 aa11.16□□□□□ -0.62
PRKCSH-220ENST00000593104 PCDHGA3Q9Y5H0 932 aa11.16□□□□□ -0.62
PRKCSH-220ENST00000593104 NAV2Q8IVL1 2488 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 LGALS16A8MUM7 142 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 PDE2AO00408 941 aaPredicted RBP11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 LRCH4O75427 683 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 ATP1A1P05023 1023 aaKnown RBP11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 IVLP07476 585 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 SFTPCP11686 197 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 POLR2LP62875 67 aaKnown RBP11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 NSUN2Q08J23 767 aaKnown RBP eCLIP11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 NFATC2Q13469 925 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 UBAP2LQ14157 1087 aaKnown RBP11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 DEFB109BQ30KR1 87 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 PYCR3Q53H96 274 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 LRRC66Q68CR7 880 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 C16orf46Q6P387 395 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 XKR5Q6UX68 686 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 TECPR1Q7Z6L1 1165 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 CBARPQ8N350 705 aaPredicted RBP11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 HSPH1Q92598 858 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 RTP4Q96DX8 246 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 MGME1Q9BQP7 344 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 ABCG8Q9H221 673 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 ZWILCHQ9H900 591 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 MYO1AQ9UBC5 1043 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 PILRAQ9UKJ1 303 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 KCNK6Q9Y257 313 aa11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 OAS3Q9Y6K5 1087 aaKnown RBP11.15□□□□□ -0.62
PRKCSH-220ENST00000593104 COL12A1Q99715 3063 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 TMEM191CA6NGB0 347 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 ZNF891A8MT65 544 aaPredicted RBP11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 PRPSAP2O60256 369 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 MAFKO60675 156 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 PGLSO95336 258 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 F8A1P23610 371 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 CCR10P46092 362 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 FOXK1P85037 733 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 CDC20Q12834 499 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 RFTN1Q14699 578 aaPredicted RBP11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 ZNF648Q5T619 568 aaPredicted RBP11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 PLEKHA7Q6IQ23 1121 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 TMEM71Q6P5X7 295 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 APTXQ7Z2E3 356 aaKnown RBP11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 IRF2BP2Q7Z5L9 587 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 TMEM135Q86UB9 458 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 PIH1D2Q8WWB5 315 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 NCSTNQ92542 709 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 AP2M1Q96CW1 435 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 AHCYL2Q96HN2 611 aaKnown RBP11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 BTBD6Q96KE9 485 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 NUDCD1Q96RS6 583 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 SLC38A3Q99624 504 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 DDA1Q9BW61 102 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 TBC1D10AQ9BXI6 508 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 SPRY4Q9C004 299 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 CDH19Q9H159 772 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 HSD3B7Q9H2F3 369 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 GPN2Q9H9Y4 310 aaPredicted RBP11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 ARFGAP3Q9NP61 516 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 NT5MQ9NPB1 228 aa11.14□□□□□ -0.63
PRKCSH-220ENST00000593104 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 SNX2O60749 519 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 SOCS5O75159 536 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 ASMTLO95671 621 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 TPM2P07951 284 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 CYP2A6P11509 494 aaPredicted RBP11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 ATP1A3P13637 1013 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 ZNF28P17035 718 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 HTR7P34969 479 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 CASRP41180 1078 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 MMP13P45452 471 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 GPR3P46089 330 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 RENBPP51606 427 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 GFERP55789 205 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 DSC2Q02487 901 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 PTSQ03393 145 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 TRA2AQ13595 282 aaKnown RBP eCLIP11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 DCAF12Q5T6F0 453 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 CHST15Q7LFX5 561 aaPredicted RBP11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 POLNQ7Z5Q5 900 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 CPNE8Q86YQ8 564 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 NLGN4XQ8N0W4 816 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 SFRP1Q8N474 314 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 NLGN4YQ8NFZ3 816 aaPredicted RBP11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 C9orf43Q8TAL5 461 aaPredicted RBP11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 STARD8Q92502 1023 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 ZNF653Q96CK0 615 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 ABHD17AQ96GS6 310 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 ELMO2Q96JJ3 720 aa11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 MCCC1Q96RQ3 725 aaPredicted RBP11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 RIOK2Q9BVS4 552 aaKnown RBP11.13□□□□□ -0.63
PRKCSH-220ENST00000593104 B3GNT4Q9C0J1 378 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms