RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 TDRD1Q9BXT4 1180 aaKnown RBP13.24□□□□□ -0.29
APOC1-209ENST00000592885 FOXP3Q9BZS1 431 aa13.24□□□□□ -0.29
APOC1-209ENST00000592885 AKAP7Q9P0M2 348 aaPredicted RBP13.24□□□□□ -0.29
APOC1-209ENST00000592885 TAAR2Q9P1P5 351 aa13.24□□□□□ -0.29
APOC1-209ENST00000592885 CTTNBP2NLQ9P2B4 639 aa13.24□□□□□ -0.29
APOC1-209ENST00000592885 GOLGA6CA6NDK9 693 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 GOLGA6BA6NDN3 693 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 ZNF487B1APH4 448 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 CPNE6O95741 557 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 SOD1P00441 154 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 FGF1P05230 155 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 GOLGA6DP0CG33 693 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 LIPCP11150 499 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 SLC5A2P31639 672 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 CASP14P31944 242 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 GNPDA1P46926 289 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 EPHB1P54762 984 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 B4GALNT1Q00973 533 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 CFHR1Q03591 330 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 ITKQ08881 620 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 MMRN1Q13201 1228 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 LRP8Q14114 963 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 SLC18A3Q16572 532 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 CCDC81Q6ZN84 652 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 VSIG1Q86XK7 387 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 Q8N9G6 341 aaPredicted RBP13.23□□□□□ -0.29
APOC1-209ENST00000592885 TTC9Q92623 222 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 AP2M1Q96CW1 435 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 ZNF830Q96NB3 372 aaPredicted RBP13.23□□□□□ -0.29
APOC1-209ENST00000592885 OR2M4Q96R27 311 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 LYSMD1Q96S90 227 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 CCNL2Q96S94 520 aaPredicted RBP13.23□□□□□ -0.29
APOC1-209ENST00000592885 DPYSL5Q9BPU6 564 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 ABCG8Q9H221 673 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 SPATS2LQ9NUQ6 558 aaKnown RBP13.23□□□□□ -0.29
APOC1-209ENST00000592885 GOLGA6AQ9NYA3 693 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 IFNKQ9P0W0 207 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 UNC13CQ8NB66 2214 aa13.23□□□□□ -0.29
APOC1-209ENST00000592885 ZFC3H1O60293 1989 aaKnown RBP13.22□□□□□ -0.29
APOC1-209ENST00000592885 SSU72P8A0A1W2PR75 194 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 RHPN2P1A8MT19 583 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 HGSO14964 777 aaPredicted RBP13.22□□□□□ -0.29
APOC1-209ENST00000592885 PRB1P04280 392 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 PDHA1P08559 390 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 CTPS1P17812 591 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 GJC1P36383 396 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 ADCY8P40145 1251 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 STC1P52823 247 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 MAZP56270 477 aaKnown RBP13.22□□□□□ -0.29
APOC1-209ENST00000592885 CTBSQ01459 385 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 TRA2AQ13595 282 aaKnown RBP eCLIP13.22□□□□□ -0.29
APOC1-209ENST00000592885 PIM3Q86V86 326 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 JAMLQ86YT9 394 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 ZNF843Q8N446 348 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 DNAJC7Q99615 494 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 RBM22Q9NW64 420 aaKnown RBP eCLIP13.22□□□□□ -0.29
APOC1-209ENST00000592885 VPS18Q9P253 973 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 PISDQ9UG56 409 aa13.22□□□□□ -0.29
APOC1-209ENST00000592885 RGSL1A5PLK6 1076 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 CBFA2T2O43439 604 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 ECEL1O95672 775 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 FUCA1P04066 466 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 HLA-DQB2P05538 268 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 TMEM253P0C7T8 217 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 AK4P27144 223 aaPredicted RBP13.21□□□□□ -0.29
APOC1-209ENST00000592885 DSC2Q02487 901 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 PTSQ03393 145 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 BIRC2Q13490 618 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 SQSTM1Q13501 440 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 ZSCAN23Q3MJ62 389 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 PHF19Q5T6S3 580 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 SLC30A9Q6PML9 568 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 GALNT13Q8IUC8 556 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 SFTPA2Q8IWL1 248 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 CCDC13Q8IYE1 715 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 NAGSQ8N159 534 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 EXD1Q8NHP7 514 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 ARRDC2Q8TBH0 407 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 COX14Q96I36 57 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 DEF6Q9H4E7 631 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 PCDH9Q9HC56 1237 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 SEPT10Q9P0V9 454 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 TTLL3Q9Y4R7 772 aa13.21□□□□□ -0.29
APOC1-209ENST00000592885 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.2□□□□□ -0.3
APOC1-209ENST00000592885 B4GAT1O43505 415 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 HGFP14210 728 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 KDELR1P24390 212 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 ACTR1BP42025 376 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 FASLGP48023 281 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 TAS2R40P59535 323 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 ACTR1AP61163 376 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 GPLD1P80108 840 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 IFI35P80217 286 aaPredicted RBP13.2□□□□□ -0.3
APOC1-209ENST00000592885 GBE1Q04446 702 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 PPIDQ08752 370 aaKnown RBP13.2□□□□□ -0.3
APOC1-209ENST00000592885 ASTE1Q2TB18 679 aaPredicted RBP13.2□□□□□ -0.3
APOC1-209ENST00000592885 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 PYCR3Q53H96 274 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 TMEM164Q5U3C3 297 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 DOK6Q6PKX4 331 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms