RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 SPAM1P38567 509 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 SATB1Q01826 763 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 GABPB1Q06547 395 aaPredicted RBP22.71■■□□□ 1.23
SPHK1-210ENST00000592299 PSAPL1Q6NUJ1 521 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 TAS2R42Q7RTR8 314 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 TRMT11Q7Z4G4 463 aaKnown RBP22.71■■□□□ 1.23
SPHK1-210ENST00000592299 GPATCH11Q8N954 259 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 ALKBH8Q96BT7 664 aaKnown RBP22.71■■□□□ 1.23
SPHK1-210ENST00000592299 GPR22Q99680 433 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 C19orf43Q9BQ61 176 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 IL26Q9NPH9 171 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 PCMTD2Q9NV79 361 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 ITM2BQ9Y287 266 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 CRYL1Q9Y2S2 319 aa22.71■■□□□ 1.23
SPHK1-210ENST00000592299 SCN8AQ9UQD0 1980 aa22.7■■□□□ 1.23
SPHK1-210ENST00000592299 GLYATL1P3A0A0U1RQE8 302 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 GPR39O43194 453 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 SRP72O76094 671 aaKnown RBP22.7■■□□□ 1.22
SPHK1-210ENST00000592299 ADRB3P13945 408 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 HOXB2P14652 356 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 MMP12P39900 470 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 STC1P52823 247 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 KIAA1211LQ6NV74 962 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 ERN2Q76MJ5 926 aaKnown RBP22.7■■□□□ 1.22
SPHK1-210ENST00000592299 DPPA4Q7L190 304 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 CMC1Q7Z7K0 106 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 GALNT7Q86SF2 657 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 PIANPQ8IYJ0 282 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 CBARPQ8N350 705 aaPredicted RBP22.7■■□□□ 1.22
SPHK1-210ENST00000592299 GPR26Q8NDV2 337 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 ACVR1CQ8NER5 493 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 GABRG3Q99928 467 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 SLC13A1Q9BZW2 595 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 RSPH9Q9H1X1 276 aaPredicted RBP22.7■■□□□ 1.22
SPHK1-210ENST00000592299 CAB39LQ9H9S4 337 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 PKD2L2Q9NZM6 624 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 NDRG2Q9UN36 371 aaKnown RBP22.7■■□□□ 1.22
SPHK1-210ENST00000592299 DUSP12Q9UNI6 340 aa22.7■■□□□ 1.22
SPHK1-210ENST00000592299 FAM95CA0A1B0GW59 222 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 CHN1P15882 459 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 SERPINB8P50452 374 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 NEK3P51956 506 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 MRPS21P82921 87 aaKnown RBP22.69■■□□□ 1.22
SPHK1-210ENST00000592299 CACNG1Q06432 222 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 USP10Q14694 798 aaKnown RBP22.69■■□□□ 1.22
SPHK1-210ENST00000592299 CST6Q15828 149 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 RFLNAQ6ZTI6 216 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 SH2D5Q6ZV89 423 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 ADHFE1Q8IWW8 467 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 MGARPQ8TDB4 240 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 ELMO2Q96JJ3 720 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 SNX15Q9NRS6 342 aa22.69■■□□□ 1.22
SPHK1-210ENST00000592299 SMG5Q9UPR3 1016 aaKnown RBP22.69■■□□□ 1.22
SPHK1-210ENST00000592299 FAM47DPA6NHR8 397 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 NEMP1O14524 444 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 MID1O15344 667 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 ADAM23O75077 832 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 NDUFS3O75489 264 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 ELFN1P0C7U0 828 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 SPINT3P49223 89 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 SLC18A2Q05940 514 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 ELP6Q0PNE2 266 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 RALGDSQ12967 914 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 MPP2Q14168 576 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 TYSND1Q2T9J0 566 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 FBXO43Q4G163 708 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 SLC41A1Q8IVJ1 513 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 BANPQ8N9N5 519 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.68■■□□□ 1.228e-9■■■■■ 37.8
SPHK1-210ENST00000592299 NDNQ99608 321 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 ASB8Q9H765 288 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 NKIRAS1Q9NYS0 192 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 CD84Q9UIB8 345 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 UBA6A0AVT1 1052 aaPredicted RBP22.68■■□□□ 1.22
SPHK1-210ENST00000592299 SHISA7A6NL88 538 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 GAPDHSO14556 408 aaPredicted RBP22.68■■□□□ 1.22
SPHK1-210ENST00000592299 COPEO14579 308 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 PFDN6O15212 129 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 PRPF4O43172 522 aaKnown RBP eCLIP22.68■■□□□ 1.225e-6■□□□□ 8.1
SPHK1-210ENST00000592299 TYROBPO43914 113 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 ITGALP20701 1170 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 RPA3P35244 121 aaPredicted RBP22.68■■□□□ 1.22
SPHK1-210ENST00000592299 P2RY2P41231 377 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 TTPAP49638 278 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 CLCN5P51795 746 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 CNTN1Q12860 1018 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 MLF2Q15773 248 aaPredicted RBP22.68■■□□□ 1.22
SPHK1-210ENST00000592299 CHRNA6Q15825 494 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 AARS2Q5JTZ9 985 aaKnown RBP22.68■■□□□ 1.22
SPHK1-210ENST00000592299 TTC19Q6DKK2 380 aaPredicted RBP22.68■■□□□ 1.22
SPHK1-210ENST00000592299 HSD11B1LQ7Z5J1 315 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 OR2T3Q8NH03 318 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 RPLP0P6Q8NHW5 317 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 TCF12Q99081 682 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 WRAP53Q9BUR4 548 aaKnown RBP22.68■■□□□ 1.22
SPHK1-210ENST00000592299 SSU72Q9NP77 194 aaKnown RBP22.68■■□□□ 1.22
SPHK1-210ENST00000592299 INTS10Q9NVR2 710 aaKnown RBP22.68■■□□□ 1.22
SPHK1-210ENST00000592299 CA14Q9ULX7 337 aa22.68■■□□□ 1.22
SPHK1-210ENST00000592299 ADH1BP00325 375 aa22.67■■□□□ 1.22
SPHK1-210ENST00000592299 GUCY1A3Q02108 690 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms