RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ZKSCAN5Q9Y2L8 839 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 ATP8A1Q9Y2Q0 1164 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 DGKBQ9Y6T7 804 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 ATMQ13315 3056 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 ZNF462Q96JM2 2506 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 DOCK4Q8N1I0 1966 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SHROOM3Q8TF72 1996 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 CFAP46Q8IYW2 2715 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 A0A1W2PQ67 120 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 TSPAN11A1L157 253 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 ARHGAP42A6NI28 874 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 TNFRSF10CO14798 259 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 DAPK3O43293 454 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 SERPING1P05155 500 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 PCCBP05166 539 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 HOXC4P09017 264 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-226ENST00000591534 CCDC175P0C221 793 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 CASP14P31944 242 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 RFC1P35251 1148 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-226ENST00000591534 CSNK1DP48730 415 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 ZNF143P52747 638 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-226ENST00000591534 NDST2P52849 883 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 TPI1P60174 286 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 CCL7P80098 99 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 BIRC2Q13490 618 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 RFTN1Q14699 578 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-226ENST00000591534 IFI16Q16666 785 aaKnown RBP9.47□□□□□ -0.89
BRCA1-226ENST00000591534 CLPPQ16740 277 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-226ENST00000591534 WSCD2Q2TBF2 565 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 LRRC73Q5JTD7 316 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 MANEAQ5SRI9 462 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 KIAA1614Q5VZ46 1190 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 PHF13Q86YI8 300 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-226ENST00000591534 CCNJLQ8IV13 435 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 KYQ8NBH2 561 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 FAM46DQ8NEK8 389 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 OR56A4Q8NGH8 313 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 JOSD2Q8TAC2 188 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 RBM15Q96T37 977 aaKnown RBP eCLIP9.47□□□□□ -0.89
BRCA1-226ENST00000591534 SLC30A3Q99726 388 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 CNPY3Q9BT09 278 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 B3GNT4Q9C0J1 378 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 SEPT11Q9NVA2 429 aaKnown RBP9.47□□□□□ -0.89
BRCA1-226ENST00000591534 AIPL1Q9NZN9 384 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 ZFATQ9P243 1243 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 PISDQ9UG56 409 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 LOXL2Q9Y4K0 774 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 OR1A2Q9Y585 309 aa9.47□□□□□ -0.89
BRCA1-226ENST00000591534 MYLKQ15746 1914 aa9.46□□□□□ -0.89
BRCA1-226ENST00000591534 A0A1W2PNU3 283 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-226ENST00000591534 NUDT21O43809 227 aaKnown RBP9.46□□□□□ -0.9
BRCA1-226ENST00000591534 PALMO75781 387 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 WISP1O95388 367 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 GYPCP04921 128 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 ELFN1P0C7U0 828 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 UNGP13051 313 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-226ENST00000591534 VAMP1P23763 118 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 MMP12P39900 470 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 CSRP3P50461 194 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 RENBPP51606 427 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 ZNF135P52742 658 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-226ENST00000591534 KIAA1024LP59773 190 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 BCL2L1Q07817 233 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 NSUN2Q08J23 767 aaKnown RBP eCLIP9.46□□□□□ -0.9
BRCA1-226ENST00000591534 CYTH1Q15438 398 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 CLEC16AQ2KHT3 1053 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 C14orf28Q4W4Y0 310 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 CERCAMQ5T4B2 595 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 E4F1Q66K89 784 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-226ENST00000591534 WDR59Q6PJI9 974 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 OGFOD3Q6PK18 319 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 PIM3Q86V86 326 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 VWA5B2Q8N398 1253 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 Q8N9G6 341 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-226ENST00000591534 GPR156Q8NFN8 814 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.46□□□□□ -0.9
BRCA1-226ENST00000591534 CINPQ9BW66 212 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-226ENST00000591534 MAGEB5Q9BZ81 275 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 FOXP3Q9BZS1 431 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 DPEP2Q9H4A9 486 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 CAAP1Q9H8G2 361 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 KCND1Q9NSA2 647 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 LRIT1Q9P2V4 623 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 LCMT1Q9UIC8 334 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 FZD10Q9ULW2 581 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 NEU3Q9UQ49 428 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 TRPM6Q9BX84 2022 aa9.46□□□□□ -0.9
BRCA1-226ENST00000591534 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-226ENST00000591534 CDC14CA4D256 554 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 RHPN2P1A8MT19 583 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 AKR1B10O60218 316 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 PRAMEF11O60813 436 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 RECQL5O94762 991 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-226ENST00000591534 PIGNO95427 931 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 CELA2BP08218 269 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-226ENST00000591534 KRT10P13645 584 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 ITIH2P19823 946 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 PDX1P52945 283 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 AP1S1P61966 158 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 ZFP36L1Q07352 338 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms