RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 DGKBQ9Y6T7 804 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 TPRP12270 2363 aaKnown RBP9.17□□□□□ -0.94
DNMT1-223ENST00000591239 GOLGA4Q13439 2230 aaKnown RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 LY6G6EA0A0G2JKS1 128 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 LOC285095A0A1B0GVY8 99 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 PRSS38A1L453 326 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 FAM221BA6H8Z2 402 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 GOLGA6L9A6NEM1 432 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 YY2O15391 372 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 KCNN4O15554 427 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 RFPL3O75679 317 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 SOD1P00441 154 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 EPOP01588 193 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 ANXA6P08133 673 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 CELA2BP08218 269 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 CDK4P11802 303 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 CKMT1AP12532 417 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 TEAD1P28347 426 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 TNNT3P45378 269 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 GPR1P46091 355 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 SPINT3P49223 89 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 WNT3AP56704 352 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 DAB2P98082 770 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 CDK3Q00526 305 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 KLF1Q13351 362 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 ILKQ13418 452 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 ELOCQ15369 112 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 TCEA2Q15560 299 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 SMAD1Q15797 465 aaKnown RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 ZCCHC8Q6NZY4 707 aaKnown RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 KDELC1Q6UW63 502 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 DHRS13Q6UX07 377 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 ADAMTSL4Q6UY14 1074 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 LYSMD3Q7Z3D4 306 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 SDR16C5Q8N3Y7 309 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 FSTL5Q8N475 847 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 TTC13Q8NBP0 860 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 EID2BQ96D98 161 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 OXNAD1Q96HP4 312 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 MRGPRX2Q96LB1 330 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 CNTNAP3BQ96NU0 1288 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 WDR24Q96S15 920 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 RIOK2Q9BVS4 552 aaKnown RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 CNTNAP3Q9BZ76 1288 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 GBA3Q9H227 469 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 ZFYVE1Q9HBF4 777 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 USP29Q9HBJ7 922 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 CYP4F12Q9HCS2 524 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 MRPL40Q9NQ50 206 aaKnown RBP9.16□□□□□ -0.94
DNMT1-223ENST00000591239 PKD2L2Q9NZM6 624 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 NCKIPSDQ9NZQ3 722 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 RSPH14Q9UHP6 348 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 MOSPD1Q9UJG1 213 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 SHOC2Q9UQ13 582 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 MSRB2Q9Y3D2 182 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 U3KQA8 63 aa9.16□□□□□ -0.94
DNMT1-223ENST00000591239 TCRBV7S2A1N4TA0A589 114 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 RGSL1A5PLK6 1076 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 ZNF189O75820 626 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-223ENST00000591239 STK10O94804 968 aaKnown RBP9.15□□□□□ -0.94
DNMT1-223ENST00000591239 FUCA1P04066 466 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 CEACAM5P06731 702 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 PYGLP06737 847 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 MYF5P13349 255 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 DUSP3P51452 185 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-223ENST00000591239 MPP3Q13368 585 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 RPS6KA1Q15418 735 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 SLC1A5Q15758 541 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 SIRPB2Q5JXA9 342 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 ANKRD20A2Q5SQ80 823 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 C6orf132Q5T0Z8 1188 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 HENMT1Q5T8I9 393 aaKnown RBP9.15□□□□□ -0.94
DNMT1-223ENST00000591239 SEL1L2Q5TEA6 688 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 MEI1Q5TIA1 1274 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 ANKRD20A1Q5TYW2 823 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 ANKRD20A3Q5VUR7 823 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 ITPRIPL1Q6GPH6 555 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 LVRNQ6Q4G3 990 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 CCNI2Q6ZMN8 369 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-223ENST00000591239 TMPRSS7Q7RTY8 843 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 TMC3Q7Z5M5 1100 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 GKN2Q86XP6 184 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 GALNT15Q8N3T1 639 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 SLC25A41Q8N5S1 370 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 IPMKQ8NFU5 416 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 CCDC110Q8TBZ0 833 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 SCG3Q8WXD2 468 aaKnown RBP9.15□□□□□ -0.94
DNMT1-223ENST00000591239 GLMNQ92990 594 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 HIC2Q96JB3 615 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 ALS2CR12Q96Q35 445 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 SRPK1Q96SB4 655 aaKnown RBP9.15□□□□□ -0.94
DNMT1-223ENST00000591239 AGAP2Q99490 1192 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 GORASP1Q9BQQ3 440 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 BOCQ9BWV1 1114 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 FSD1LQ9BXM9 530 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 FRMD8Q9BZ67 464 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-223ENST00000591239 GPR63Q9BZJ6 419 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 TMEM168Q9H0V1 697 aa9.15□□□□□ -0.94
DNMT1-223ENST00000591239 FAM83DQ9H4H8 585 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms