RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 DACH1Q9UI36 760 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 TRBV23OR9-2A0A075B6M9 112 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-225ENST00000586385 TMEM191CA6NGB0 347 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 ZNF891A8MT65 544 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-225ENST00000586385 LGALS16A8MUM7 142 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 EIF3CLB5ME19 914 aaKnown RBP11.83□□□□□ -0.52
BRCA1-225ENST00000586385 MAFKO60675 156 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 PDHA1P08559 390 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 TCF4P15884 667 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 PSMA2P25787 234 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 IL1R2P27930 398 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 CSTF2P33240 577 aaKnown RBP eCLIP11.83□□□□□ -0.52
BRCA1-225ENST00000586385 CCR10P46092 362 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 FASLGP48023 281 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 HCAR3P49019 387 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 MAXP61244 160 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 DPTQ07507 201 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 PPP6R3Q5H9R7 873 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-225ENST00000586385 CT47A1Q5JQC4 288 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-225ENST00000586385 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-225ENST00000586385 FKBP15Q5T1M5 1219 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 ATP1A1-AS1Q5TC04 95 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 RAET1GQ6H3X3 334 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 TMEM71Q6P5X7 295 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 IRF2BP2Q7Z5L9 587 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 FAM129CQ86XR2 697 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 SFRP1Q8N474 314 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 PIH1D2Q8WWB5 315 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 SCAMP4Q969E2 229 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 SCRN2Q96FV2 425 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 ZNF599Q96NL3 588 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 EIF3CQ99613 913 aaKnown RBP11.83□□□□□ -0.52
BRCA1-225ENST00000586385 CTRCQ99895 268 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 NUP62CLQ9H1M0 184 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 ABCG8Q9H221 673 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 HSD3B7Q9H2F3 369 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 APMAPQ9HDC9 416 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 KCNK4Q9NYG8 393 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 DONSONQ9NYP3 566 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 CD84Q9UIB8 345 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 PPIL1Q9Y3C6 166 aa11.83□□□□□ -0.52
BRCA1-225ENST00000586385 USP9YO00507 2555 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-225ENST00000586385 ANKRD62A6NC57 917 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 K7EM74 188 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 PSMD11O00231 422 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 LRCH4O75427 683 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 PGLSO95336 258 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 PRKAR1AP10644 381 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 CTPS1P17812 591 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 RENBPP51606 427 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 MC2RQ01718 297 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 CDC20Q12834 499 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 DCAF12Q5T6F0 453 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 ADAMTSL4Q6UY14 1074 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 PAF1Q8N7H5 531 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 PDCD6IPQ8WUM4 868 aaKnown RBP11.82□□□□□ -0.52
BRCA1-225ENST00000586385 COX14Q96I36 57 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 PSMG3-AS1Q96PY0 264 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 ERGIC2Q96RQ1 377 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 ASPSCR1Q9BZE9 553 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 LIMA1Q9UHB6 759 aaKnown RBP11.82□□□□□ -0.52
BRCA1-225ENST00000586385 PHTF1Q9UMS5 762 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 PLAAQ9Y263 795 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 MAN2B2Q9Y2E5 1009 aa11.82□□□□□ -0.52
BRCA1-225ENST00000586385 USP9XQ93008 2570 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-225ENST00000586385 A6NCN8 305 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 GOLGA6CA6NDK9 693 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 GOLGA6BA6NDN3 693 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 A8MU76 341 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 TMCO5BA8MYB1 307 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 DAPK3O43293 454 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 FZD6O60353 706 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 MAP3K6O95382 1288 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 DLGAP3O95886 979 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 GOLGA6DP0CG33 693 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 GP1BBP13224 206 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 AMPD1P23109 780 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 F8A1P23610 371 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 GPLD1P80108 840 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 PTSQ03393 145 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 ZNF235Q14590 738 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 SNAP47Q5SQN1 464 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 E4F1Q66K89 784 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 LRRC66Q68CR7 880 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 TXNRD3NBQ6F5E7 133 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 MARK2Q7KZI7 788 aaKnown RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 POLNQ7Z5Q5 900 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 PSTKQ8IV42 348 aaKnown RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 NRSN1Q8IZ57 195 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 NLGN4XQ8N0W4 816 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 CCDC112Q8NEF3 446 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 NLGN4YQ8NFZ3 816 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 NEK11Q8NG66 645 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 C9orf43Q8TAL5 461 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 RNF31Q96EP0 1072 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 ABHD17AQ96GS6 310 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 CATSPER2Q96P56 530 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 WDR24Q96S15 920 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 DPYSL5Q9BPU6 564 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms