RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 RAET1GQ6H3X3 334 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 AADACL2Q6P093 401 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 FOXR1Q6PIV2 292 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 PGBD5Q8N414 524 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.7■□□□□ 0.58
ATG4D-203ENST00000585752 TEX26Q8N6G2 289 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 FUBP1Q96AE4 644 aaKnown RBP18.7■□□□□ 0.58
ATG4D-203ENST00000585752 ZNF578Q96N58 590 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-203ENST00000585752 CYP4F12Q9HCS2 524 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 PNMA8BQ9ULN7 279 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-203ENST00000585752 RAI2Q9Y5P3 530 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 DGKBQ9Y6T7 804 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 PSMD11O00231 422 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 TNFRSF10CO14798 259 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 ZNF189O75820 626 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-203ENST00000585752 STK10O94804 968 aaKnown RBP18.69■□□□□ 0.58
ATG4D-203ENST00000585752 HEXIM1O94992 359 aaKnown RBP18.69■□□□□ 0.58
ATG4D-203ENST00000585752 PGLSO95336 258 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 MPOP05164 745 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 CTPS1P17812 591 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 OTUD4Q01804 1114 aaKnown RBP18.69■□□□□ 0.58
ATG4D-203ENST00000585752 ADCY2Q08462 1091 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 TRAF2Q12933 501 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 XRCC4Q13426 336 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 BIRC2Q13490 618 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 NOMO1Q15155 1222 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 ISXQ2M1V0 245 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 TBC1D25Q3MII6 688 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 C3orf38Q5JPI3 329 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 CDKL3Q8IVW4 592 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-203ENST00000585752 REXO1L1PQ8IX06 675 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 FAM46DQ8NEK8 389 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 SCRN2Q96FV2 425 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 CARD9Q9H257 536 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 POLR1BQ9H9Y6 1135 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 JRKLQ9Y4A0 524 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 ASXL3Q9C0F0 2248 aa18.69■□□□□ 0.58
ATG4D-203ENST00000585752 TMX2-CTNND1H3BSU7 103 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 TLX3O43711 291 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 CELA2BP08218 269 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 MYCLP1P12525 358 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 GPR1P46091 355 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 LSSP48449 732 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 PCBP4P57723 403 aaKnown RBP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 EIF3EP60228 445 aaKnown RBP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 IFI35P80217 286 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 PEX6Q13608 980 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 CNGA3Q16281 694 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 PERM1Q5SV97 790 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 BROXQ5VW32 411 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 DARS2Q6PI48 645 aaKnown RBP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 B4GALNT4Q76KP1 1039 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 ZNF248Q8NDW4 579 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 ACTL9Q8TC94 416 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 SPOCK2Q92563 424 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 PDXPQ96GD0 296 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 COQ10AQ96MF6 247 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 QKIQ96PU8 341 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 GFM1Q96RP9 751 aaKnown RBP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 RBM15Q96T37 977 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 DPEP2Q9H4A9 486 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 SUDS3Q9H7L9 328 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-203ENST00000585752 THSD1Q9NS62 852 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 DNPEPQ9ULA0 475 aa18.68■□□□□ 0.58
ATG4D-203ENST00000585752 ANKRD11Q6UB99 2663 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-203ENST00000585752 CFAP47Q6ZTR5 3102 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 TMEM202A6NGA9 273 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 ZW10O43264 779 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 HLA-DQB2P05538 268 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 TRIM23P36406 574 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 ETV3P41162 512 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 TNNT3P45378 269 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-203ENST00000585752 PRKD1Q15139 912 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-203ENST00000585752 KYQ8NBH2 561 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 SNIP1Q8TAD8 396 aaKnown RBP18.67■□□□□ 0.58
ATG4D-203ENST00000585752 OR1E3Q8WZA6 343 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 DTD2Q96FN9 168 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 AGAP3Q96P47 875 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 GSDMCQ9BYG8 508 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 CEP41Q9BYV8 373 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 STRADBQ9C0K7 418 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 CARS2Q9HA77 564 aaKnown RBP18.67■□□□□ 0.58
ATG4D-203ENST00000585752 MRPL40Q9NQ50 206 aaKnown RBP18.67■□□□□ 0.58
ATG4D-203ENST00000585752 KLHL8Q9P2G9 620 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-203ENST00000585752 PYCARDQ9ULZ3 195 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 SATB2Q9UPW6 733 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.67■□□□□ 0.58
ATG4D-203ENST00000585752 ZZEF1O43149 2961 aa18.67■□□□□ 0.58
ATG4D-203ENST00000585752 FREM2Q5SZK8 3169 aa18.66■□□□□ 0.58
ATG4D-203ENST00000585752 PRSS38A1L453 326 aa18.66■□□□□ 0.58
ATG4D-203ENST00000585752 NPIPB15A6NHN6 443 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-203ENST00000585752 B4DGG1 531 aa18.66■□□□□ 0.58
ATG4D-203ENST00000585752 RBP3P10745 1247 aa18.66■□□□□ 0.58
ATG4D-203ENST00000585752 DSC2Q02487 901 aa18.66■□□□□ 0.58
ATG4D-203ENST00000585752 ILF3Q12906 894 aaKnown RBP eCLIP18.66■□□□□ 0.58
ATG4D-203ENST00000585752 ZBTB17Q13105 803 aa18.66■□□□□ 0.58
ATG4D-203ENST00000585752 HSD11B1LQ7Z5J1 315 aa18.66■□□□□ 0.58
ATG4D-203ENST00000585752 HEATR4Q86WZ0 1026 aa18.66■□□□□ 0.58
ATG4D-203ENST00000585752 ARL14Q8N4G2 192 aa18.66■□□□□ 0.58
ATG4D-203ENST00000585752 MAIP1Q8WWC4 291 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms