RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.81■□□□□ 0.44
ERBB2-221ENST00000584888 KIAA1524Q8TCG1 905 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 GRAMD1AQ96CP6 724 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 NUS1Q96E22 293 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 ATXN7L3BQ96GX2 97 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 NAF1Q96HR8 494 aaKnown RBP17.81■□□□□ 0.44
ERBB2-221ENST00000584888 TEKT5Q96M29 485 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 WDR92Q96MX6 357 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 FCRL3Q96P31 734 aaPredicted RBP17.81■□□□□ 0.44
ERBB2-221ENST00000584888 TRIB3Q96RU7 358 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 HERPUD2Q9BSE4 406 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 CEP41Q9BYV8 373 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 SLC25A51Q9H1U9 297 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 GULP1Q9UBP9 304 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 SATB2Q9UPW6 733 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 EFR3BQ9Y2G0 817 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 TTLL3Q9Y4R7 772 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 ENTPD2Q9Y5L3 495 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 ARHGEF17Q96PE2 2063 aaPredicted RBP17.81■□□□□ 0.44
ERBB2-221ENST00000584888 LOC400499M0QZD8 3231 aa17.81■□□□□ 0.44
ERBB2-221ENST00000584888 TMEM202A6NGA9 273 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 CAPN8A6NHC0 703 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 TNFRSF10CO14798 259 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 TCEA3O75764 348 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 ZNF30P17039 623 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 CA4P22748 312 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 PTPN3P26045 913 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 STC1P52823 247 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 SRP54P61011 504 aaKnown RBP17.8■□□□□ 0.44
ERBB2-221ENST00000584888 DPTQ07507 201 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 TCEA2Q15560 299 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 QPCTQ16769 361 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 C3orf38Q5JPI3 329 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 RFLNAQ6ZTI6 216 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 NT5DC3Q86UY8 548 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 RAVER1Q8IY67 606 aaKnown RBP17.8■□□□□ 0.44
ERBB2-221ENST00000584888 NDUFAF2Q8N183 169 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 TFB1MQ8WVM0 346 aaKnown RBP17.8■□□□□ 0.44
ERBB2-221ENST00000584888 SCG3Q8WXD2 468 aaKnown RBP17.8■□□□□ 0.44
ERBB2-221ENST00000584888 AGAP3Q96P47 875 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 CCDC3Q9BQI4 270 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 LGR4Q9BXB1 951 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 TEX101Q9BY14 249 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 GLOD4Q9HC38 313 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 ASCL3Q9NQ33 180 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 SIRPGQ9P1W8 387 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 TRIM10Q9UDY6 481 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 KLQ9UEF7 1012 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 DGKBQ9Y6T7 804 aa17.8■□□□□ 0.44
ERBB2-221ENST00000584888 CCDC66A2RUB6 948 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 ANKRD66B4E2M5 251 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 CD68P34810 354 aaPredicted RBP17.79■□□□□ 0.44
ERBB2-221ENST00000584888 ARHGEF7Q14155 803 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 LRRC66Q68CR7 880 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 IGF2-ASQ6U949 168 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 GPR155Q7Z3F1 870 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 KIAA1328Q86T90 577 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 SDR16C5Q8N3Y7 309 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 ARL10Q8N8L6 244 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 ATL2Q8NHH9 583 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 WDR48Q8TAF3 677 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 OR1E3Q8WZA6 343 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 ALG3Q92685 438 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 P3H4Q92791 437 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 RBM15Q96T37 977 aaKnown RBP eCLIP17.79■□□□□ 0.44
ERBB2-221ENST00000584888 DESI2Q9BSY9 194 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 HEMGNQ9BXL5 484 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 ABCG8Q9H221 673 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 THSD1Q9NS62 852 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 DNPEPQ9ULA0 475 aa17.79■□□□□ 0.44
ERBB2-221ENST00000584888 HACD1B0YJ81 288 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 APOC4-APOC2K7ER74 178 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 CACNB4O00305 520 aaPredicted RBP17.78■□□□□ 0.44
ERBB2-221ENST00000584888 SOD1P00441 154 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 TNFP01375 233 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 APOC2P02655 101 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 RBMS1P29558 406 aaKnown RBP17.78■□□□□ 0.44
ERBB2-221ENST00000584888 EPHB1P54762 984 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 NAP1L1P55209 391 aaKnown RBP17.78■□□□□ 0.44
ERBB2-221ENST00000584888 XRCC4Q13426 336 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 DENND2CQ68D51 928 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 ZNF765Q7L2R6 523 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 GKN2Q86XP6 184 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 CCDC50Q8IVM0 306 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 KYQ8NBH2 561 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 LPCAT1Q8NF37 534 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 OR56A4Q8NGH8 313 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 PRR11Q96HE9 360 aaPredicted RBP17.78■□□□□ 0.44
ERBB2-221ENST00000584888 SLC46A1Q96NT5 459 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 QKIQ96PU8 341 aaKnown RBP eCLIP17.78■□□□□ 0.44
ERBB2-221ENST00000584888 WDR26Q9H7D7 661 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 FGF22Q9HCT0 170 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 SEPT10Q9P0V9 454 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 GPR34Q9UPC5 381 aa17.78■□□□□ 0.44
ERBB2-221ENST00000584888 COL27A1Q8IZC6 1860 aaPredicted RBP17.78■□□□□ 0.44
ERBB2-221ENST00000584888 ATXN7O15265 892 aaPredicted RBP17.77■□□□□ 0.44
ERBB2-221ENST00000584888 MTSS1O43312 755 aa17.77■□□□□ 0.44
ERBB2-221ENST00000584888 CLDN7O95471 211 aa17.77■□□□□ 0.44
ERBB2-221ENST00000584888 FUCA1P04066 466 aa17.77■□□□□ 0.44
ERBB2-221ENST00000584888 PYGMP11217 842 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms