RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 GPR1P46091 355 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 DPTQ07507 201 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 PTP4A2Q12974 167 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 ZNF235Q14590 738 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 SNAP47Q5SQN1 464 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 FHL5Q5TD97 284 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 USP45Q70EL2 814 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 ARHGAP22Q7Z5H3 698 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 GALNT13Q8IUC8 556 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 CCDC13Q8IYE1 715 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 UNC5BQ8IZJ1 945 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 BBS5Q8N3I7 341 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 SFRP1Q8N474 314 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 AVL9Q8NBF6 648 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 PDCD6IPQ8WUM4 868 aaKnown RBP13.3□□□□□ -0.28
COPS3-218ENST00000584216 SCARF2Q96GP6 870 aaPredicted RBP13.3□□□□□ -0.28
COPS3-218ENST00000584216 ZNF599Q96NL3 588 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 MCEEQ96PE7 176 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 CTRCQ99895 268 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.3□□□□□ -0.28
COPS3-218ENST00000584216 PRDM8Q9NQV8 689 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 PLEKHB1Q9UF11 243 aaPredicted RBP13.3□□□□□ -0.28
COPS3-218ENST00000584216 PHTF1Q9UMS5 762 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 AP4E1Q9UPM8 1137 aa13.3□□□□□ -0.28
COPS3-218ENST00000584216 LRRK1Q38SD2 2015 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 A8MU76 341 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 INPP4BO15327 924 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 HTRA2O43464 458 aaPredicted RBP13.29□□□□□ -0.28
COPS3-218ENST00000584216 TPM2P07951 284 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 CHRNB2P17787 502 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 EEF1GP26641 437 aaKnown RBP13.29□□□□□ -0.28
COPS3-218ENST00000584216 ZNF135P52742 658 aaPredicted RBP13.29□□□□□ -0.28
COPS3-218ENST00000584216 EPHA4P54764 986 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 HHEXQ03014 270 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 BECN1Q14457 450 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 LBRQ14739 615 aaKnown RBP13.29□□□□□ -0.28
COPS3-218ENST00000584216 CAMK4Q16566 473 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 CLEC16AQ2KHT3 1053 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 DOK6Q6PKX4 331 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 ADAMTSL4Q6UY14 1074 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 ASB18Q6ZVZ8 466 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 TIPARPQ7Z3E1 657 aaKnown RBP13.29□□□□□ -0.28
COPS3-218ENST00000584216 NDUFAF2Q8N183 169 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 SLC37A2Q8TED4 501 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 NCSTNQ92542 709 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 SARS2Q9NP81 518 aaKnown RBP13.29□□□□□ -0.28
COPS3-218ENST00000584216 POLHQ9Y253 713 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 KCNMB2Q9Y691 235 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 RPS6KL1Q9Y6S9 549 aa13.29□□□□□ -0.28
COPS3-218ENST00000584216 ZFC3H1O60293 1989 aaKnown RBP13.29□□□□□ -0.28
COPS3-218ENST00000584216 RFPL1O75677 317 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 DLGAP3O95886 979 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 KRT7P08729 469 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 POLD2P49005 469 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 POLR2FP61218 127 aaKnown RBP13.28□□□□□ -0.28
COPS3-218ENST00000584216 RALGPS1Q5JS13 557 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.28□□□□□ -0.28
COPS3-218ENST00000584216 RFX8Q6ZV50 586 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 Q6ZVL8 140 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 MON1BQ7L1V2 547 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 HSD11B1LQ7Z5J1 315 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 SLC9B2Q86UD5 537 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 PLXDC1Q8IUK5 500 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 CBARPQ8N350 705 aaPredicted RBP13.28□□□□□ -0.28
COPS3-218ENST00000584216 GALNT11Q8NCW6 608 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 SCRN2Q96FV2 425 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 NUDCD1Q96RS6 583 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 HERPUD2Q9BSE4 406 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 ULBP3Q9BZM4 244 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 VPS16Q9H269 839 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 GANQ9H2C0 597 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 DHX35Q9H5Z1 703 aaKnown RBP13.28□□□□□ -0.28
COPS3-218ENST00000584216 SEPT11Q9NVA2 429 aaKnown RBP13.28□□□□□ -0.28
COPS3-218ENST00000584216 KCND3Q9UK17 655 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 ST14Q9Y5Y6 855 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 ANKRD36A6QL64 1941 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 TEX15Q9BXT5 2789 aa13.28□□□□□ -0.28
COPS3-218ENST00000584216 GADD45BO75293 160 aaPredicted RBP13.27□□□□□ -0.29
COPS3-218ENST00000584216 MAP3K6O95382 1288 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 ANKRD34CP0C6C1 535 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 DLSTP36957 453 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 MLLT10P55197 1068 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 JAM2P57087 298 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 PYCR3Q53H96 274 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 HSP90AA4PQ58FG1 418 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 TCP11X2Q5H9J9 407 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 FKBP15Q5T1M5 1219 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 ERMARDQ5T6L9 678 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 C6orf15Q6UXA7 325 aaPredicted RBP13.27□□□□□ -0.29
COPS3-218ENST00000584216 ZNF761Q86XN6 746 aaPredicted RBP13.27□□□□□ -0.29
COPS3-218ENST00000584216 ARHGAP12Q8IWW6 846 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 NSMCE1Q8WV22 266 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 PTCD2Q8WV60 388 aaKnown RBP13.27□□□□□ -0.29
COPS3-218ENST00000584216 AP2M1Q96CW1 435 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 DNPEPQ9ULA0 475 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 PCDHGC4Q9Y5F7 938 aa13.27□□□□□ -0.29
COPS3-218ENST00000584216 USP9YO00507 2555 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms