RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, human

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SS18-222	ENST00000582792	ZNF891	A8MT65	544 aa	Predicted RBP	13.53	□□□□□ -0.24
SS18-222	ENST00000582792	DFFA	O00273	331 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	HTRA2	O43464	458 aa	Predicted RBP	13.53	□□□□□ -0.24
SS18-222	ENST00000582792	RAD1	O60671	282 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	HEXIM1	O94992	359 aa	Known RBP	13.53	□□□□□ -0.24
SS18-222	ENST00000582792	ERCC2	P18074	760 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	CDC25B	P30305	580 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	VIPR1	P32241	457 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	ADCY8	P40145	1251 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	CCR10	P46092	362 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	RENBP	P51606	427 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	CDK3	Q00526	305 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	CTBS	Q01459	385 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	UBAP2L	Q14157	1087 aa	Known RBP	13.53	□□□□□ -0.24
SS18-222	ENST00000582792	SKIDA1	Q1XH10	827 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	ARHGAP36	Q6ZRI8	547 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	RFX8	Q6ZV50	586 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	CBARP	Q8N350	705 aa	Predicted RBP	13.53	□□□□□ -0.24
SS18-222	ENST00000582792	NPW	Q8N729	165 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	OR8K1	Q8NGG5	319 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	DTD2	Q96FN9	168 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	DNAJC7	Q99615	494 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	AGPAT1	Q99943	283 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	DHX35	Q9H5Z1	703 aa	Known RBP	13.53	□□□□□ -0.24
SS18-222	ENST00000582792	SLC39A1	Q9NY26	324 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	SLC17A4	Q9Y2C5	497 aa		13.53	□□□□□ -0.24
SS18-222	ENST00000582792	USP9Y	O00507	2555 aa	Predicted RBP	13.52	□□□□□ -0.24
SS18-222	ENST00000582792	TTC24	A2A3L6	582 aa	Predicted RBP	13.52	□□□□□ -0.25
SS18-222	ENST00000582792		B4E171	279 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	CAPN5	O15484	640 aa	Predicted RBP	13.52	□□□□□ -0.25
SS18-222	ENST00000582792	DAPK3	O43293	454 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	SOCS5	O75159	536 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	NTRK1	P04629	796 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	SERPING1	P05155	500 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	IVL	P07476	585 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	MPST	P25325	297 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	TEAD1	P28347	426 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	CASP14	P31944	242 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	ETV3	P41162	512 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	CASR	P41180	1078 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	TSPAN7	P41732	249 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	RAB15	P59190	212 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	GPLD1	P80108	840 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	FOXK1	P85037	733 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	KLHL30	Q0D2K2	578 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	SLC10A7	Q0GE19	358 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	LBR	Q14739	615 aa	Known RBP	13.52	□□□□□ -0.25
SS18-222	ENST00000582792	DCAF12	Q5T6F0	453 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	ERMARD	Q5T6L9	678 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	TMCO4	Q5TGY1	634 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	DENND2C	Q68D51	928 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	CNGA4	Q8IV77	575 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	MCOLN2	Q8IZK6	566 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	SCARF2	Q96GP6	870 aa	Predicted RBP	13.52	□□□□□ -0.25
SS18-222	ENST00000582792	SLC45A3	Q96JT2	553 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	ZNF599	Q96NL3	588 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	KCTD15	Q96SI1	283 aa	Predicted RBP	13.52	□□□□□ -0.25
SS18-222	ENST00000582792	SNRNP25	Q9BV90	132 aa	Known RBP	13.52	□□□□□ -0.25
SS18-222	ENST00000582792	OCIAD1	Q9NX40	245 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	KCNK4	Q9NYG8	393 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	TMEM9	Q9P0T7	183 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	ANAPC2	Q9UJX6	822 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	PCDHGC4	Q9Y5F7	938 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	NBAS	A2RRP1	2371 aa		13.52	□□□□□ -0.25
SS18-222	ENST00000582792	EFCAB7	A8K855	629 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	PSMD11	O00231	422 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	MFAP3L	O75121	409 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	CP	P00450	1065 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	GZMA	P12544	262 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	TNFAIP3	P21580	790 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	LHCGR	P22888	699 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	PSMA2	P25787	234 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	NFKBIA	P25963	317 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	ACTR1B	P42025	376 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	POLD2	P49005	469 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	ACTR1A	P61163	376 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	E4F1	Q66K89	784 aa	Predicted RBP	13.51	□□□□□ -0.25
SS18-222	ENST00000582792	HGSNAT	Q68CP4	663 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	RAET1G	Q6H3X3	334 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	ACAD10	Q6JQN1	1059 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	TMEM71	Q6P5X7	295 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	HSD11B1L	Q7Z5J1	315 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	FAM129C	Q86XR2	697 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	ARFGAP1	Q8N6T3	406 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	BMPER	Q8N8U9	685 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.51	□□□□□ -0.25
SS18-222	ENST00000582792	CPLX3	Q8WVH0	158 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	TEFM	Q96QE5	360 aa	Known RBP	13.51	□□□□□ -0.25
SS18-222	ENST00000582792	PEBP4	Q96S96	227 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	HAUS4	Q9H6D7	363 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	PDP2	Q9P2J9	529 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	PILRA	Q9UKJ1	303 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	PHTF1	Q9UMS5	762 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	PLEKHM1	Q9Y4G2	1056 aa		13.51	□□□□□ -0.25
SS18-222	ENST00000582792	CLEC18A	A5D8T8	446 aa		13.5	□□□□□ -0.25
SS18-222	ENST00000582792	GOLGA6C	A6NDK9	693 aa		13.5	□□□□□ -0.25
SS18-222	ENST00000582792	GOLGA6B	A6NDN3	693 aa		13.5	□□□□□ -0.25
SS18-222	ENST00000582792	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.5	□□□□□ -0.25
SS18-222	ENST00000582792	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.5	□□□□□ -0.25
SS18-222	ENST00000582792	NKX2-8	O15522	239 aa		13.5	□□□□□ -0.25

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