RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 ARMC12Q5T9G4 340 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 E4F1Q66K89 784 aaPredicted RBP10.57□□□□□ -0.72
RFFL-209ENST00000581265 DENND2CQ68D51 928 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 SLC30A9Q6PML9 568 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 VASH2Q86V25 355 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 LRRC49Q8IUZ0 686 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 TEX26Q8N6G2 289 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 AOPEPQ8N6M6 819 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 NSMCE1Q8WV22 266 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 PTCD2Q8WV60 388 aaKnown RBP10.57□□□□□ -0.72
RFFL-209ENST00000581265 PIH1D2Q8WWB5 315 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 ZNF653Q96CK0 615 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 GBP4Q96PP9 640 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 TAAR9Q96RI9 348 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 NUDT22Q9BRQ3 303 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 NAT10Q9H0A0 1025 aaKnown RBP10.57□□□□□ -0.72
RFFL-209ENST00000581265 LRRC4CQ9HCJ2 640 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 STMND1H3BQB6 276 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 FZD6O60353 706 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 SOD1P00441 154 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 FGF3P11487 239 aaPredicted RBP10.56□□□□□ -0.72
RFFL-209ENST00000581265 TCF4P15884 667 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 WT1P19544 449 aaPredicted RBP10.56□□□□□ -0.72
RFFL-209ENST00000581265 IL4RP24394 825 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 MMP13P45452 471 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 GPR1P46091 355 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 ARSDP51689 593 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 MAXP61244 160 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 TYRO3Q06418 890 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 KLHL30Q0D2K2 578 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 PIGHQ14442 188 aaPredicted RBP10.56□□□□□ -0.72
RFFL-209ENST00000581265 PTPRRQ15256 657 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 TBR1Q16650 682 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 SMTNL2Q2TAL5 461 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 FILIP1LQ4L180 1135 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 RAET1GQ6H3X3 334 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 ADAMTSL4Q6UY14 1074 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 USP45Q70EL2 814 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 TSPAN33Q86UF1 283 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 NDUFAF2Q8N183 169 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 ATPAF2Q8N5M1 289 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 AGBL5Q8NDL9 886 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 RCBTB1Q8NDN9 531 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 OR4D9Q8NGE8 314 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 TEKT4Q8WW24 435 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 PATE1Q8WXA2 126 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 HSPH1Q92598 858 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 NKD1Q969G9 470 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 DPYSL5Q9BPU6 564 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 BPIFA3Q9BQP9 254 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 ABCG8Q9H221 673 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.56□□□□□ -0.72
RFFL-209ENST00000581265 PDP2Q9P2J9 529 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 MYO1AQ9UBC5 1043 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 SRPK3Q9UPE1 567 aa10.56□□□□□ -0.72
RFFL-209ENST00000581265 IGHV1OR21-1A0A087WYE8 117 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 SMTNL1A8MU46 457 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 PYGLP06737 847 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 PDHA1P08559 390 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 FAM87AP0C7U9 286 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 SKILP12757 684 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 ZNF30P17039 623 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 CTPS1P17812 591 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 CES1P23141 567 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 SERPINB6P35237 376 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 FASLGP48023 281 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 GPLD1P80108 840 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 PTSQ03393 145 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 BIRC2Q13490 618 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 LRP8Q14114 963 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 PYCR3Q53H96 274 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 CCDC183Q5T5S1 534 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 NKAIN2Q5VXU1 208 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 LRRC66Q68CR7 880 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 TXNRD3NBQ6F5E7 133 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 ALG1LQ6GMV1 187 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 TMEM71Q6P5X7 295 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 RFLNAQ6ZTI6 216 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 ZNF765Q7L2R6 523 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 RAVER1Q8IY67 606 aaKnown RBP10.55□□□□□ -0.72
RFFL-209ENST00000581265 NIPA2Q8N8Q9 360 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 FAM71BQ8TC56 605 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 HTR3CQ8WXA8 447 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 SCAMP4Q969E2 229 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 AP2M1Q96CW1 435 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 CCDC74BQ96LY2 380 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 NAP1L5Q96NT1 182 aaPredicted RBP10.55□□□□□ -0.72
RFFL-209ENST00000581265 OR2M4Q96R27 311 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 DDA1Q9BW61 102 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 SLC12A9Q9BXP2 914 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 ASPSCR1Q9BZE9 553 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 CDH19Q9H159 772 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 SUDS3Q9H7L9 328 aaPredicted RBP10.55□□□□□ -0.72
RFFL-209ENST00000581265 PCDH18Q9HCL0 1135 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 GEMIN8Q9NWZ8 242 aaKnown RBP10.55□□□□□ -0.72
RFFL-209ENST00000581265 RCOR3Q9P2K3 495 aaPredicted RBP10.55□□□□□ -0.72
RFFL-209ENST00000581265 MAN2B2Q9Y2E5 1009 aa10.55□□□□□ -0.72
RFFL-209ENST00000581265 TMEM98Q9Y2Y6 226 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms