RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 POLBP06746 335 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 HOXC4P09017 264 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 GSTA2P09210 222 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 PIRTP0C851 137 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 TSHRP16473 764 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 TPH1P17752 444 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 PGAM1P18669 254 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 PAMP19021 973 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 BCKDHBP21953 392 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 MGAT1P26572 445 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 CD27P26842 260 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 AKT2P31751 481 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 TRIM23P36406 574 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 SPAM1P38567 509 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 SESN2P58004 480 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 PPP2CBP62714 309 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 PPP2CAP67775 309 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 OVGP1Q12889 678 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 SGCGQ13326 291 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 MTM1Q13496 603 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 FGL2Q14314 439 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 LRRC14Q15048 493 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 ACOX1Q15067 660 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 PLK5Q496M5 336 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 CCDC38Q502W7 563 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 WDR45BQ5MNZ6 344 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 FNBP1LQ5T0N5 605 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 TSTD2Q5T7W7 516 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 PEAR1Q5VY43 1037 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 STEAP4Q687X5 459 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 SEL1L3Q68CR1 1132 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 KIAA0930Q6ICG6 404 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 ZNF449Q6P9G9 518 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 Q6ZVL8 140 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 CYS1Q717R9 158 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 HSD11B1LQ7Z5J1 315 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 PACS2Q86VP3 889 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 IQCHQ86VS3 1027 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 LMNTD2Q8IXW0 634 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 FAM160A2Q8N612 972 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 TP53I13Q8NBR0 393 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 CENPTQ96BT3 561 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 NUS1Q96E22 293 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 VPS35Q96QK1 796 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 KLF6Q99612 283 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 EBNA1BP2Q99848 306 aaKnown RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 ORAI3Q9BRQ5 295 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 WRAP53Q9BUR4 548 aaKnown RBP10.37□□□□□ -0.75
CCDC47-203ENST00000580986 EPC1Q9H2F5 836 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 SMOXQ9NWM0 555 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 SYBUQ9NX95 663 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 HS3ST3A1Q9Y663 406 aa10.37□□□□□ -0.75
CCDC47-203ENST00000580986 SPAG17Q6Q759 2223 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 FAM47DPA6NHR8 397 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 AVILO75366 819 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 SPAG6O75602 509 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 BPIP17213 487 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 ETV3P41162 512 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 CARSP49589 748 aaKnown RBP10.36□□□□□ -0.75
CCDC47-203ENST00000580986 YPEL5P62699 121 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 RACK1P63244 317 aaKnown RBP10.36□□□□□ -0.75
CCDC47-203ENST00000580986 DHX9Q08211 1270 aaKnown RBP10.36□□□□□ -0.75
CCDC47-203ENST00000580986 ITGA9Q13797 1035 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 HLTFQ14527 1009 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC47-203ENST00000580986 SLMAPQ14BN4 828 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 PTPRRQ15256 657 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 TRADDQ15628 312 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 KCTD19Q17RG1 926 aaPredicted RBP10.36□□□□□ -0.75
CCDC47-203ENST00000580986 GPR33Q49SQ1 333 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 MSS51Q4VC12 460 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 SPANXN3Q5MJ09 141 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 KYAT3Q6YP21 454 aaKnown RBP10.36□□□□□ -0.75
CCDC47-203ENST00000580986 RABEPKQ7Z6M1 372 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 ABI3BPQ7Z7G0 1075 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 SLC41A1Q8IVJ1 513 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 AGGF1Q8N302 714 aaeCLIP10.36□□□□□ -0.75
CCDC47-203ENST00000580986 MPP5Q8N3R9 675 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 TRAM1L1Q8N609 369 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 FRMD1Q8N878 549 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 GPR26Q8NDV2 337 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 OR4K2Q8NGD2 314 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 OR13J1Q8NGT2 312 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 C1orf216Q8TAB5 229 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 STAMBPL1Q96FJ0 436 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 CDKN2AIPNLQ96HQ2 116 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 HSPA12BQ96MM6 686 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 SMIM14Q96QK8 99 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 FAM83DQ9H4H8 585 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 GPR27Q9NS67 375 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 PIH1D1Q9NWS0 290 aaKnown RBP10.36□□□□□ -0.75
CCDC47-203ENST00000580986 SUSD2Q9UGT4 822 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 RAB21Q9UL25 225 aa10.36□□□□□ -0.75
CCDC47-203ENST00000580986 TRBV5-4A0A0C4DH59 114 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 GLYATL1P3A0A0U1RQE8 302 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 ZCWPW2A0A1B0GU75 182 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 PRR5-ARHGAP8B1AHC4 643 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 GPR89AB7ZAQ6 455 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 GAPDHSO14556 408 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-203ENST00000580986 MAGEC1O60732 1142 aa10.35□□□□□ -0.75
CCDC47-203ENST00000580986 PAK4O96013 591 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms