RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 FSTL5Q8N475 847 aaPredicted RBP19.43■□□□□ 0.7
SS18-209ENST00000578595 TRIM58Q8NG06 486 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 CCDC110Q8TBZ0 833 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 SCG3Q8WXD2 468 aaKnown RBP19.43■□□□□ 0.7
SS18-209ENST00000578595 ADAMTS14Q8WXS8 1223 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 OXNAD1Q96HP4 312 aaPredicted RBP19.43■□□□□ 0.7
SS18-209ENST00000578595 LYSMD1Q96S90 227 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 FICDQ9BVA6 458 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 CARS2Q9HA77 564 aaKnown RBP19.43■□□□□ 0.7
SS18-209ENST00000578595 TOR4AQ9NXH8 423 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 KLK13Q9UKR3 277 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 R3HDM2Q9Y2K5 976 aaKnown RBP19.43■□□□□ 0.7
SS18-209ENST00000578595 CSNK1G3Q9Y6M4 447 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 KNTC1P50748 2209 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 TCRBV7S2A1N4TA0A589 114 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 PRSS38A1L453 326 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 GCATO75600 419 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 ZNF189O75820 626 aaPredicted RBP19.42■□□□□ 0.7
SS18-209ENST00000578595 ANXA9O76027 345 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 ASMTLO95671 621 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 PYGLP06737 847 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 CELA2BP08218 269 aaPredicted RBP19.42■□□□□ 0.7
SS18-209ENST00000578595 TRIM23P36406 574 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 PROX2Q3B8N5 592 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 MEI1Q5TIA1 1274 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 ZCCHC8Q6NZY4 707 aaKnown RBP19.42■□□□□ 0.7
SS18-209ENST00000578595 KDELC1Q6UW63 502 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 ZNF765Q7L2R6 523 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 TRIM74Q86UV6 250 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 GKN2Q86XP6 184 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 NRSN1Q8IZ57 195 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 BLOC1S5Q8TDH9 187 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 ATG4AQ8WYN0 398 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 GLMNQ92990 594 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 APOLD1Q96LR9 279 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 SPATA13Q96N96 652 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 SIRPGQ9P1W8 387 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 PLXNB3Q9ULL4 1909 aa19.42■□□□□ 0.7
SS18-209ENST00000578595 CHRNA4P43681 627 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 GNPDA1P46926 289 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 SPINT3P49223 89 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 ACADVLP49748 655 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 DPTQ07507 201 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 SIRPB2Q5JXA9 342 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 KCTD16Q68DU8 428 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 MARK2Q7KZI7 788 aaKnown RBP19.41■□□□□ 0.7
SS18-209ENST00000578595 RAB44Q7Z6P3 723 aaPredicted RBP19.41■□□□□ 0.7
SS18-209ENST00000578595 TAF8Q7Z7C8 310 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 TAB3Q8N5C8 712 aaPredicted RBP19.41■□□□□ 0.7
SS18-209ENST00000578595 FAM71DQ8N9W8 422 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 TADA1Q96BN2 335 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 LRRC45Q96CN5 670 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 MRGPRX2Q96LB1 330 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 AGAP2Q99490 1192 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 SPATA16Q9BXB7 569 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 TEX101Q9BY14 249 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 CLPBQ9H078 707 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 FAM83DQ9H4H8 585 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 MAGEE1Q9HCI5 957 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 GULP1Q9UBP9 304 aa19.41■□□□□ 0.7
SS18-209ENST00000578595 MAP1BP46821 2468 aaKnown RBP19.41■□□□□ 0.7
SS18-209ENST00000578595 CPED1A4D0V7 1026 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 LMO7DNF2Z398 122 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 HOXC4P09017 264 aaPredicted RBP19.4■□□□□ 0.7
SS18-209ENST00000578595 GIMD1P0DJR0 217 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 HLA-DPA1P20036 260 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 DUSP3P51452 185 aaPredicted RBP19.4■□□□□ 0.7
SS18-209ENST00000578595 KLF1Q13351 362 aaPredicted RBP19.4■□□□□ 0.7
SS18-209ENST00000578595 CDKN3Q16667 212 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 ADAMTSL4Q6UY14 1074 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 ZNF662Q6ZS27 426 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 GLT6D1Q7Z4J2 308 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 CBARPQ8N350 705 aaPredicted RBP19.4■□□□□ 0.7
SS18-209ENST00000578595 UBE2Q2Q8WVN8 375 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 TBATAQ96M53 351 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 SRPK1Q96SB4 655 aaKnown RBP19.4■□□□□ 0.7
SS18-209ENST00000578595 APOL2Q9BQE5 337 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 TMEM121Q9BTD3 319 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 CARD9Q9H257 536 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 TMEM98Q9Y2Y6 226 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 AAR2Q9Y312 384 aaKnown RBP19.4■□□□□ 0.7
SS18-209ENST00000578595 SPO11Q9Y5K1 396 aa19.4■□□□□ 0.7
SS18-209ENST00000578595 TPP1O14773 563 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 TNFRSF10CO14798 259 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 FGF1P05230 155 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 POLD2P49005 469 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 RPIAP49247 311 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 SHC2P98077 582 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 SNX1Q13596 522 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 SLC1A5Q15758 541 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 ZNF569Q5MCW4 686 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 C6orf132Q5T0Z8 1188 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 SLC13A5Q86YT5 568 aaPredicted RBP19.39■□□□□ 0.69
SS18-209ENST00000578595 C1orf54Q8WWF1 131 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 HIC2Q96JB3 615 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 TMEM168Q9H0V1 697 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 SYNDIG1Q9H7V2 258 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 BPIFA1Q9NP55 256 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 RAD18Q9NS91 495 aa19.39■□□□□ 0.69
SS18-209ENST00000578595 NCKIPSDQ9NZQ3 722 aa19.39■□□□□ 0.69
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