RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 SLFN11Q7Z7L1 901 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 NOP9Q86U38 636 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 FAM129CQ86XR2 697 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 CAMK1DQ8IU85 385 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 CCDC185Q8N715 623 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 SLC30A5Q8TAD4 765 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 C9orf43Q8TAL5 461 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 GPT2Q8TD30 523 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 FAM172AQ8WUF8 416 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 ART4Q93070 314 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 FUBP1Q96AE4 644 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 KIAA1143Q96AT1 154 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 AHCYL2Q96HN2 611 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 ZNF641Q96N77 438 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 GSDMCQ9BYG8 508 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 CDH19Q9H159 772 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 WDR26Q9H7D7 661 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 ATP13A3Q9H7F0 1226 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 CATSPERBQ9H7T0 1116 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 GPN2Q9H9Y4 310 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 CARS2Q9HA77 564 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 LRRC4CQ9HCJ2 640 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 FGF22Q9HCT0 170 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 SPATS2LQ9NUQ6 558 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 GOLGA6AQ9NYA3 693 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 LHX3Q9UBR4 397 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 ANAPC2Q9UJX6 822 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 ATP8A1Q9Y2Q0 1164 aa6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 GPC6Q9Y625 555 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-212ENST00000577721 TDRD6O60522 2096 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 TRBV23OR9-2A0A075B6M9 112 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 PRSS38A1L453 326 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 BLACEA4D250 179 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 CFAP69A5D8W1 941 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 A8MU76 341 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 NKX2-8O15522 239 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 BUB1BO60566 1050 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 PALMO75781 387 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 HOXC4P09017 264 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 KRT3P12035 628 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 CCNB1P14635 433 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 CD1CP29017 333 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 SERPINA4P29622 427 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 MMP12P39900 470 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 STAT1P42224 750 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 GNPDA1P46926 289 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 POLR2LP62875 67 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 NOMO3P69849 1222 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 BCL2L1Q07817 233 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 SERINC3Q13530 473 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 TRA2AQ13595 282 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 PEX6Q13608 980 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 SEPT6Q14141 434 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 MAN2A1Q16706 1144 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 CLPPQ16740 277 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 DEFB109BQ30KR1 87 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 PARP15Q460N3 678 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 VWA3BQ502W6 1294 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 KLHDC7AQ5VTJ3 777 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 DENND2CQ68D51 928 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 PNCKQ6P2M8 343 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 SLC30A9Q6PML9 568 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 LIPIQ6XZB0 460 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 STRADAQ7RTN6 431 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 SRLQ86TD4 932 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 FAM114A1Q8IWE2 563 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 PYROXD2Q8N2H3 581 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 FAM26EQ8N5C1 309 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 RTL3Q8N8U3 475 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 JOSD2Q8TAC2 188 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 VOPP1Q96AW1 172 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 TUBGCP5Q96RT8 1024 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 C11orf70Q9BRQ4 267 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 SELENOOQ9BVL4 669 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 LGR4Q9BXB1 951 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 ASPSCR1Q9BZE9 553 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 NDST4Q9H3R1 872 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 NOL6Q9H6R4 1146 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 BRD7Q9NPI1 651 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 PHPT1Q9NRX4 125 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 KCNK4Q9NYG8 393 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 TAAR2Q9P1P5 351 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 TUBD1Q9UJT1 453 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 PLAAQ9Y263 795 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 MAN2B2Q9Y2E5 1009 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 B3GALT1Q9Y5Z6 326 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 FHOD1Q9Y613 1164 aa6.86□□□□□ -1.31
SMARCE1-212ENST00000577721 DOCK9Q9BZ29 2069 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 TSPAN11A1L157 253 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 ANKRD62A6NC57 917 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 ARHGAP42A6NI28 874 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 C2CD4BA6NLJ0 364 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 J3KR12 359 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 PPM1DO15297 605 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 DAPK3O43293 454 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 GFPT2O94808 682 aa6.85□□□□□ -1.31
SMARCE1-212ENST00000577721 WNT11O96014 354 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms