RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 CERCAMQ5T4B2 595 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 NPNTQ6UXI9 565 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 BZW1Q7L1Q6 419 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 TAF8Q7Z7C8 310 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 NRROSQ86YC3 692 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 KATNAL2Q8IYT4 538 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 FAM46DQ8NEK8 389 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 LPCAT1Q8NF37 534 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 CCL4L1Q8NHW4 92 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 FGF11Q92914 225 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 SCAMP4Q969E2 229 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 CCDC74AQ96AQ1 378 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 COX14Q96I36 57 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 HIC2Q96JB3 615 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 WDR24Q96S15 920 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 ADGRE3Q9BY15 652 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 SLC25A51Q9H1U9 297 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 GOLPH3Q9H4A6 298 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 POLR1BQ9H9Y6 1135 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 CARS2Q9HA77 564 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 LUC7LQ9NQ29 371 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 ASCL3Q9NQ33 180 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 SIRPGQ9P1W8 387 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 SUFUQ9UMX1 484 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 PCDHGA8Q9Y5G5 932 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 ST14Q9Y5Y6 855 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 ATRXP46100 2492 aa12.4□□□□□ -0.42
CSNK1D-206ENST00000577578 A0A1W2PQM1 296 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 NUDT21O43809 227 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 NDUFA10O95299 355 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 CLDN7O95471 211 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 MPOP05164 745 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 CYLC1P35663 651 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 NOP2P46087 812 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 GPR1P46091 355 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 ERVPABLB-1P60509 514 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 GABREP78334 506 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 ADCY2Q08462 1091 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 SPIDRQ14159 915 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 SPA17Q15506 151 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 TCEA2Q15560 299 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 COL28A1Q2UY09 1125 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 C14orf28Q4W4Y0 310 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 TEX44Q53QW1 395 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 ODF2Q5BJF6 829 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 TFDP3Q5H9I0 405 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 HENMT1Q5T8I9 393 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 SPOCD1Q6ZMY3 1216 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 ZNF438Q7Z4V0 828 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 NT5DC3Q86UY8 548 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 RFX6Q8HWS3 928 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 SFTPA2Q8IWL1 248 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 EXD1Q8NHP7 514 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 ATXN7L3BQ96GX2 97 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 TEKT5Q96M29 485 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 ZNF578Q96N58 590 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 AGAP2Q99490 1192 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 MLPHQ9BV36 600 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 RIOK2Q9BVS4 552 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 GSDMCQ9BYG8 508 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 CEP41Q9BYV8 373 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 NFKBIL1Q9UBC1 381 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 CD84Q9UIB8 345 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 RALYQ9UKM9 306 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 TFR2Q9UP52 801 aa12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 EPN1Q9Y6I3 576 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-206ENST00000577578 hCG_1818297A0A087WSY0 165 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 C1orf232A0A0U1RR37 186 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 RCCD1A6NED2 376 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 BTNL10A8MVZ5 291 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 D6RAR5 112 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 CST8O60676 142 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 ZRANB2O95218 330 aaKnown RBP eCLIP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 PECAM1P16284 738 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 PTPN3P26045 913 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 POLD2P49005 469 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 MARCKSL1P49006 195 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 SPINT3P49223 89 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 DYNLT1P63172 113 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 WASHC5Q12768 1159 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 ILF3Q12906 894 aaKnown RBP eCLIP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 NR1D2Q14995 579 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 PPP2R5EQ16537 467 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 C19orf48Q6RUI8 117 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 TMTC1Q8IUR5 882 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 RCOR2Q8IZ40 523 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 KIAA1524Q8TCG1 905 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 HNRNPLLQ8WVV9 542 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 EID2BQ96D98 161 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 LIN37Q96GY3 246 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 PRR11Q96HE9 360 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 CALR3Q96L12 384 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 AGAP3Q96P47 875 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 CDH19Q9H159 772 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 DPEP2Q9H4A9 486 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 MAGEE1Q9HCI5 957 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 SPATS2LQ9NUQ6 558 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms