RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 MTHFD2P13995 350 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 LPOP22079 712 aaPredicted RBP23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 MC4RP32245 332 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 RHOAP61586 193 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 WDR5P61964 334 aaKnown RBP23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 GAREM2Q75VX8 874 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 ZBTB26Q9HCK0 441 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 CLEC4EQ9ULY5 219 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 PCDHB9Q9Y5E1 797 aa23.6■■□□□ 1.37
NPLOC4-217ENST00000574897 TRPC5OSA6NMA1 111 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 ANPEPP15144 967 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 CTPS1P17812 591 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 GABRR2P28476 465 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 VHLP40337 213 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 CCNIQ14094 377 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 PFKFB4Q16877 469 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 CYHR1Q6ZMK1 362 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 MAB21L3Q8N8X9 362 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 NAT14Q8WUY8 206 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 PYDC1Q8WXC3 89 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 ALG14Q96F25 216 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 NSUN5Q96P11 429 aaKnown RBP23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 DDX50Q9BQ39 737 aaKnown RBP23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 MRPL17Q9NRX2 175 aaKnown RBP23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 INTS10Q9NVR2 710 aaKnown RBP23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 NDUFS3O75489 264 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 CLTBP09497 229 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 CDH18Q13634 790 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 CYLC2Q14093 348 aaPredicted RBP23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 PTPRNQ16849 979 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 Q6ZNB5 142 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 L3HYPDHQ96EM0 354 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 ZNF333Q96JL9 665 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 ATOH8Q96SQ7 321 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 GPR21Q99679 349 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 EML4Q9HC35 981 aaKnown RBP23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 CORO1CQ9ULV4 474 aaPredicted RBP23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 POMPQ9Y244 141 aa23.59■■□□□ 1.37
NPLOC4-217ENST00000574897 ATP6AP2A0A1C7CYW4 349 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 NVLO15381 856 aaKnown RBP23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 SMAD6O43541 496 aaKnown RBP23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 ATP6AP2O75787 350 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 ALPIP09923 528 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 LAG3P18627 525 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 MUM1Q2TAK8 710 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 PELI3Q8N2H9 469 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 TTC30BQ8N4P2 665 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 HJURPQ8NCD3 748 aaPredicted RBP23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 CEP70Q8NHQ1 597 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 HMGCLL1Q8TB92 370 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 EID2BQ96D98 161 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 BIRC8Q96P09 236 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 TRAF6Q9Y4K3 522 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 ABHD14A-ACY1A0A1B0GW23 586 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 GFRA2O00451 464 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 NIPSNAP2O75323 286 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 GKP32189 559 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 GCKP35557 465 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 PPP3CCP48454 512 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 HERVK_113P63132 956 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 ZRANB3Q5FWF4 1079 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 GK5Q6ZS86 529 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 DSELQ8IZU8 1212 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 RP9Q8TA86 221 aaKnown RBP23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 DNAJC9Q8WXX5 260 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 ERVK-6Q9BXR3 956 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 ADGRE3Q9BY15 652 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 CRISPLD2Q9H0B8 497 aa23.58■■□□□ 1.37
NPLOC4-217ENST00000574897 SMIM24O75264 130 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 BAG2O95816 211 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 OLFM2O95897 454 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 KBTBD2Q8IY47 623 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 FBXW8Q8N3Y1 598 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 CCDC97Q96F63 343 aaPredicted RBP23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 MEAF6Q9HAF1 191 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 PTGDR2Q9Y5Y4 395 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 MYO7AQ13402 2215 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 CDC7O00311 574 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 TGM5O43548 720 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 CNPP09543 421 aaKnown RBP23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 SH3BP2P78314 561 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 LRRC26Q2I0M4 334 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 CAMK1DQ8IU85 385 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 C3orf30Q96M34 536 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 NPAS2Q99743 824 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 CCDC68Q9H2F9 335 aa23.57■■□□□ 1.36
NPLOC4-217ENST00000574897 A0A1B0GTL3 188 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 TRIM43BA6NCK2 446 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 STX7O15400 261 aaKnown RBP23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 CKMP06732 381 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 MSX2P35548 267 aaPredicted RBP23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 DPP6P42658 865 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 MTTPP55157 894 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 NFKB2Q00653 900 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 TSNQ15631 228 aaKnown RBP23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 RNF111Q6ZNA4 994 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 TPGS1Q6ZTW0 290 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 MFN1Q8IWA4 741 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 BBS7Q8IWZ6 715 aa23.56■■□□□ 1.36
NPLOC4-217ENST00000574897 DDI1Q8WTU0 396 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms