RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 CR2P20023 1033 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 CA4P22748 312 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 RBMS1P29558 406 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 ETV3P41162 512 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 MESDQ14696 234 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 PDK2Q15119 407 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 ANKRD20A8PQ5CZ79 823 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 PNCKQ6P2M8 343 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 LVRNQ6Q4G3 990 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 HEATR4Q86WZ0 1026 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 LRRC49Q8IUZ0 686 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 RHOT2Q8IXI1 618 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 CCNYQ8ND76 341 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 LRRN4CLQ8ND94 238 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 ZNF248Q8NDW4 579 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 FAM46DQ8NEK8 389 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 UBE2Q2Q8WVN8 375 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 CCDC74AQ96AQ1 378 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 DTD2Q96FN9 168 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 COQ10AQ96MF6 247 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 ZNF578Q96N58 590 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 GFM1Q96RP9 751 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 OSBPL9Q96SU4 736 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 RBM15Q96T37 977 aaKnown RBP eCLIP9.66□□□□□ -0.869e-7■■■■□ 22.9
NPLOC4-216ENST00000574344 CARS2Q9HA77 564 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 FGF22Q9HCT0 170 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 THSD1Q9NS62 852 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 WDR70Q9NW82 654 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 RAI2Q9Y5P3 530 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 DGKBQ9Y6T7 804 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 LRRD1A4D1F6 860 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 PSMD11O00231 422 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 TNFRSF10CO14798 259 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 RPLP0P05388 317 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 GM2AP17900 193 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 MX2P20592 715 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 LHCGRP22888 699 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 IL4RP24394 825 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 GPR1P46091 355 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 LSSP48449 732 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 TAS2R40P59535 323 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 DSC2Q02487 901 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 GALNT2Q10471 571 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 BIRC2Q13490 618 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 NAA30Q147X3 362 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 PAFAH1B3Q15102 231 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 RPS6KA1Q15418 735 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 GLIPR1L2Q4G1C9 344 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 BROXQ5VW32 411 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 KCTD16Q68DU8 428 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 DOK6Q6PKX4 331 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 HSD11B1LQ7Z5J1 315 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 TSPAN33Q86UF1 283 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 PELI3Q8N2H9 469 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 Q8N9G6 341 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 OR6C4Q8NGE1 309 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 FAM71BQ8TC56 605 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 GRAMD1AQ96CP6 724 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 FCRL3Q96P31 734 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 LGR4Q9BXB1 951 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 TMEM168Q9H0V1 697 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 DPEP2Q9H4A9 486 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 EPB41L5Q9HCM4 733 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 RBM22Q9NW64 420 aaKnown RBP eCLIP9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 CD84Q9UIB8 345 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 ENTPD2Q9Y5L3 495 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 DUSP10Q9Y6W6 482 aa9.65□□□□□ -0.86
NPLOC4-216ENST00000574344 PTPRQQ9UMZ3 2332 aa9.65□□□□□ -0.87
NPLOC4-216ENST00000574344 CCDC187A0A096LP49 1063 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 A0A0U1RQS6 177 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 D6RAR5 112 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 MATN3O15232 486 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 CASC3O15234 703 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 KRT1P04264 644 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 HLA-DQB2P05538 268 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 PDHA1P08559 390 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 HOXC4P09017 264 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 RHOXF2BP0C7M4 288 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 CCNB1P14635 433 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 KDELR1P24390 212 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 CCNCP24863 283 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 MAN1A1P33908 653 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 TRIM23P36406 574 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 GNPDA1P46926 289 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 PPM1FP49593 454 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 ARSEP51690 589 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 CXADRP78310 365 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 CCL7P80098 99 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 CDK3Q00526 305 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 GBE1Q04446 702 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 ILF3Q12906 894 aaKnown RBP eCLIP9.64□□□□□ -0.879e-7■■□□□ 12.6
NPLOC4-216ENST00000574344 PTPRRQ15256 657 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 LRRC66Q68CR7 880 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 C8orf74Q6P047 294 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 Q6ZVL8 140 aa9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 ZNF572Q7Z3I7 529 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-216ENST00000574344 PEX26Q7Z412 305 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms