RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MLPHQ9BV36 600 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 RIOK2Q9BVS4 552 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 ADGRE3Q9BY15 652 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 GSDMCQ9BYG8 508 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 FRMD8Q9BZ67 464 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 TMEM98Q9Y2Y6 226 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 ENTPD2Q9Y5L3 495 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 ALG6Q9Y672 507 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 ARID1BQ8NFD5 2236 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 LAMA5O15230 3695 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 CFAP47Q6ZTR5 3102 aa12.66□□□□□ -0.38
NPLOC4-213ENST00000573519 PSTPIP1O43586 416 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 NOBOXO60393 691 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 ASMTLO95671 621 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 PRLP01236 227 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 SLC4A1P02730 911 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 FUCA1P04066 466 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 MMP2P08253 660 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 AK4P27144 223 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 TEAD1P28347 426 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 RBMS1P29558 406 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 STC1P52823 247 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 PCBP4P57723 403 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 RPL26P61254 145 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 TFDP2Q14188 446 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 QPCTQ16769 361 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 SLC30A9Q6PML9 568 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 ADAMTSL4Q6UY14 1074 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 NT5DC3Q86UY8 548 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 CCNJLQ8IV13 435 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 CCDC50Q8IVM0 306 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 ACRBPQ8NEB7 543 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 GPR156Q8NFN8 814 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 SNIP1Q8TAD8 396 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 ZDHHC1Q8WTX9 485 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 HIC2Q96JB3 615 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 ZNF578Q96N58 590 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 OLFM3Q96PB7 478 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 AGAP2Q99490 1192 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 EPB41L5Q9HCM4 733 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 LUC7LQ9NQ29 371 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 SPATS2LQ9NUQ6 558 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 PKD2L2Q9NZM6 624 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 LRIT1Q9P2V4 623 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 SAE1Q9UBE0 346 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 RPL26L1Q9UNX3 145 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 SLC17A4Q9Y2C5 497 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 REXO2Q9Y3B8 237 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 RNF215Q9Y6U7 377 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 DUSP10Q9Y6W6 482 aa12.65□□□□□ -0.38
NPLOC4-213ENST00000573519 ANKRD66B4E2M5 251 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 AGRPO00253 132 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 NTN3O00634 580 aaPredicted RBP12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 CST8O60676 142 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 SOD1P00441 154 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 PYGLP06737 847 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 GLB1P16278 677 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 CDKN2BP42772 138 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 MAZP56270 477 aaKnown RBP12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 CTBSQ01459 385 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 CERCAMQ5T4B2 595 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 OGFOD3Q6PK18 319 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 SPOCD1Q6ZMY3 1216 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 BZW1Q7L1Q6 419 aaKnown RBP12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 ZNF765Q7L2R6 523 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 NRROSQ86YC3 692 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 NRSN1Q8IZ57 195 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 ZNF248Q8NDW4 579 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 EXD1Q8NHP7 514 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 GPBAR1Q8TDU6 330 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 HAUS1Q96CS2 278 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 BAG1Q99933 345 aaPredicted RBP12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 BRD8Q9H0E9 1235 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 CDH19Q9H159 772 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 LRRN3Q9H3W5 708 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 THSD1Q9NS62 852 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 TRNAU1APQ9NX07 287 aaKnown RBP12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 TAAR2Q9P1P5 351 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 ATXN7L1Q9ULK2 861 aaPredicted RBP12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 ADAMTS20P59510 1910 aa12.64□□□□□ -0.39
NPLOC4-213ENST00000573519 CCDC187A0A096LP49 1063 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 A0A1W2PQM1 296 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 PMS2P1A4D2B8 440 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 RHPN2P1A8MT19 583 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 D6RAR5 112 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 IPO7O95373 1038 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 FGF1P05230 155 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 IVLP07476 585 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 PIRTP0C851 137 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 PECAM1P16284 738 aaPredicted RBP12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 CDC25BP30305 580 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 ADCY8P40145 1251 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 ACTR1BP42025 376 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 MARCKSL1P49006 195 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 PDX1P52945 283 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 HADHBP55084 474 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms