RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CCDC22O60826 627 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 KATNA1O75449 491 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 MT-CO1P00395 513 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 ASGR2P07307 311 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 ANXA5P08758 320 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 AMD1P17707 334 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 CCNG1P51959 295 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 MPP1Q00013 466 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 SNCBQ16143 134 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 PFKFB4Q16877 469 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 LRRC8EQ6NSJ5 796 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 TXNDC5Q8NBS9 432 aaKnown RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 ASZ1Q8WWH4 475 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 FAM3CQ92520 227 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 ACOX2Q99424 681 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 ELOVL6Q9H5J4 265 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 USP29Q9HBJ7 922 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 SNX15Q9NRS6 342 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 ZNF212Q9UDV6 495 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 SCN1AP35498 2009 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 MMP20O60882 483 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 AKT2P31751 481 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 ALDH18A1P54886 795 aaKnown RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 PLA2G4EQ3MJ16 856 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 C6orf10Q5SRN2 563 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 TRMT10BQ6PF06 316 aaKnown RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 KIAA0408Q6ZU52 694 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 ZNF572Q7Z3I7 529 aaPredicted RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 LINGO1Q96FE5 620 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 SLC39A13Q96H72 371 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 HERPUD2Q9BSE4 406 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 TXLNGQ9NUQ3 528 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 IMP3Q9NV31 184 aaKnown RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 B4GALT6Q9UBX8 382 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 USP15Q9Y4E8 981 aaPredicted RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 PCDHB1Q9Y5F3 818 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 CCDC162PA2VCL2 907 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 OR51F1A6NGY5 319 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 NTSR1P30989 418 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 MPP7Q5T2T1 576 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 DENND6AQ8IWF6 608 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 CPXM2Q8N436 756 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 GBP7Q8N8V2 638 aaPredicted RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 RAB3IPQ96QF0 476 aaPredicted RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 CCDC3Q9BQI4 270 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 MRPL46Q9H2W6 279 aaKnown RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 KLC4Q9NSK0 619 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 IRAK3Q9Y616 596 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 TRBV23OR9-2A0A075B6M9 112 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 SPECC1L-ADORA2AF8WAN1 911 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 FAM155BO75949 473 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 RASGRP1O95267 797 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 KLKB1P03952 638 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 C2P06681 752 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 CD72P21854 359 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 PEX19P40855 299 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 ILF3Q12906 894 aaKnown RBP eCLIP10.08□□□□□ -0.87e-10■■■□□ 16.1
SMG6-213ENST00000573166 TCTN1Q2MV58 587 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 KIAA0930Q6ICG6 404 aaPredicted RBP10.08□□□□□ -0.8
SMG6-213ENST00000573166 GALNT13Q8IUC8 556 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 MPP5Q8N3R9 675 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 BEND7Q8N7W2 519 aaPredicted RBP10.08□□□□□ -0.8
SMG6-213ENST00000573166 CDKN2AIPNLQ96HQ2 116 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 LRGUKQ96M69 825 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 VCX3BQ9H321 246 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 NMRK1Q9NWW6 199 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 OPTCQ9UBM4 332 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 CDYLQ9Y232 598 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 NUMBLQ9Y6R0 609 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 PLXNA1Q9UIW2 1896 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 C16orf96A6NNT2 1141 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 H3BM21 787 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 EPOP01588 193 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 NAGLUP54802 743 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 KYAT3Q6YP21 454 aaKnown RBP10.08□□□□□ -0.8
SMG6-213ENST00000573166 KDM7AQ6ZMT4 941 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 ADAMTSL2Q86TH1 951 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 HID1Q8IV36 788 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 SLC44A1Q8WWI5 657 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 NUS1Q96E22 293 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 TCF12Q99081 682 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 RIOK2Q9BVS4 552 aaKnown RBP10.08□□□□□ -0.8
SMG6-213ENST00000573166 SPASTQ9UBP0 616 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 TMEM247A6NEH6 219 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 AGRPO00253 132 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 GSTA4O15217 222 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 SOCS5O75159 536 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 CYP17A1P05093 508 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 PCNAP12004 261 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 LAMP2P13473 410 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 VIPR1P32241 457 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 SOX9P48436 509 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 KCNJ11Q14654 390 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 FBXO43Q4G163 708 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 HECTD2Q5U5R9 776 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 LRRC66Q68CR7 880 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 TMEM220Q6QAJ8 160 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 MFSD6LQ8IWD5 586 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 KHSRPQ92945 711 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMG6-213ENST00000573166 OXNAD1Q96HP4 312 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms