RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 LVRNQ6Q4G3 990 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 ADAMTSL4Q6UY14 1074 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 LYSMD3Q7Z3D4 306 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 PEX26Q7Z412 305 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 KDELC2Q7Z4H8 507 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 NLRP8Q86W28 1048 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 GKN2Q86XP6 184 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 SYCE1Q8N0S2 351 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 ZNF567Q8N184 647 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 SDR16C5Q8N3Y7 309 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 ACTL9Q8TC94 416 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 IFI44Q8TCB0 444 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
CNOT1-220ENST00000569916 HTR3CQ8WXA8 447 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 ZCCHC14Q8WYQ9 949 aaKnown RBP12.99□□□□□ -0.33
CNOT1-220ENST00000569916 EID2BQ96D98 161 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 WDR24Q96S15 920 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 AGAP2Q99490 1192 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 VAT1Q99536 393 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 CYP4F12Q9HCS2 524 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 UBP1Q9NZI7 540 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 KLHL8Q9P2G9 620 aaPredicted RBP12.99□□□□□ -0.33
CNOT1-220ENST00000569916 PACSIN2Q9UNF0 486 aaPredicted RBP12.99□□□□□ -0.33
CNOT1-220ENST00000569916 ZNF106Q9H2Y7 1883 aaKnown RBP12.99□□□□□ -0.33
CNOT1-220ENST00000569916 MIF4GDA9UHW6 222 aaKnown RBP12.98□□□□□ -0.33
CNOT1-220ENST00000569916 DDX3YO15523 660 aaKnown RBP12.98□□□□□ -0.33
CNOT1-220ENST00000569916 OPA1O60313 960 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 PMPCBO75439 489 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 FTCDO95954 541 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 FUCA1P04066 466 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 PIRTP0C851 137 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 JUPP14923 745 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 RBL1P28749 1068 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 SPINT3P49223 89 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 PERM1Q5SV97 790 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 HENMT1Q5T8I9 393 aaKnown RBP12.98□□□□□ -0.33
CNOT1-220ENST00000569916 CCDC181Q5TID7 509 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 KDELC1Q6UW63 502 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 EFL1Q7Z2Z2 1120 aaKnown RBP12.98□□□□□ -0.33
CNOT1-220ENST00000569916 NRSN1Q8IZ57 195 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 ARL10Q8N8L6 244 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 KYQ8NBH2 561 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 CCL4L1Q8NHW4 92 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 GLMNQ92990 594 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 OXNAD1Q96HP4 312 aaPredicted RBP12.98□□□□□ -0.33
CNOT1-220ENST00000569916 FCRL5Q96RD9 977 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 RIOK2Q9BVS4 552 aaKnown RBP12.98□□□□□ -0.33
CNOT1-220ENST00000569916 TMEM168Q9H0V1 697 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 C10orf88Q9H8K7 445 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 MOSPD1Q9UJG1 213 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 ZMIZ1Q9ULJ6 1067 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 DOLKQ9UPQ8 538 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 SLC17A4Q9Y2C5 497 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 ZNF711Q9Y462 761 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 ADGRG1Q9Y653 693 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 EPG5Q9HCE0 2579 aa12.98□□□□□ -0.33
CNOT1-220ENST00000569916 RP1P56715 2156 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 CPED1A4D0V7 1026 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 TRABD2BA6NFA1 517 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 F5H423 210 aaPredicted RBP12.97□□□□□ -0.33
CNOT1-220ENST00000569916 H7C0C1 242 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 NDST3O95803 873 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 PYGLP06737 847 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 IVLP07476 585 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 ATP5OP48047 213 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 POLD2P49005 469 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 RPIAP49247 311 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 TARDBPQ13148 414 aaKnown RBP eCLIP12.97□□□□□ -0.33
CNOT1-220ENST00000569916 CDCP2Q5VXM1 449 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 PID1Q7Z2X4 250 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 TRIM74Q86UV6 250 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 CACTIN-AS1Q8N1I8 211 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 RNF10Q8N5U6 811 aaKnown RBP12.97□□□□□ -0.33
CNOT1-220ENST00000569916 UBL4BQ8N7F7 174 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
CNOT1-220ENST00000569916 DCBLD1Q8N8Z6 715 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 CCHCR1Q8TD31 782 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 SCG3Q8WXD2 468 aaKnown RBP12.97□□□□□ -0.33
CNOT1-220ENST00000569916 HES6Q96HZ4 224 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 COX14Q96I36 57 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 FAM118BQ9BPY3 351 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 GORASP1Q9BQQ3 440 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 CARS2Q9HA77 564 aaKnown RBP12.97□□□□□ -0.33
CNOT1-220ENST00000569916 ZFYVE1Q9HBF4 777 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 MAGEE1Q9HCI5 957 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 PKD2L2Q9NZM6 624 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 SIRPGQ9P1W8 387 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 FAM153AQ9UHL3 310 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 TRHDEQ9UKU6 1024 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 SUFUQ9UMX1 484 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 GPR34Q9UPC5 381 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 CLCA2Q9UQC9 943 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 ASXL3Q9C0F0 2248 aa12.97□□□□□ -0.33
CNOT1-220ENST00000569916 ARHGEF17Q96PE2 2063 aaPredicted RBP12.97□□□□□ -0.33
CNOT1-220ENST00000569916 LOC285095A0A1B0GVY8 99 aa12.96□□□□□ -0.33
CNOT1-220ENST00000569916 RGSL1A5PLK6 1076 aa12.96□□□□□ -0.33
CNOT1-220ENST00000569916 FADS2P1A8MWK0 482 aa12.96□□□□□ -0.33
CNOT1-220ENST00000569916 INPP4BO15327 924 aa12.96□□□□□ -0.33
CNOT1-220ENST00000569916 ARHGAP6O43182 974 aa12.96□□□□□ -0.33
CNOT1-220ENST00000569916 TJP3O95049 919 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms