RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	NIPAL4	Q0D2K0	466 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	ZBTB17	Q13105	803 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	XRCC4	Q13426	336 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	CAMK2B	Q13554	666 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	PRPSAP1	Q14558	356 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	RTP5	Q14D33	572 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	LLGL1	Q15334	1064 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	SLC14A2	Q15849	920 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	PPP2R5E	Q16537	467 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	DOK6	Q6PKX4	331 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	TECPR1	Q7Z6L1	1165 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	MARCH9	Q86YJ5	346 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	GALNT13	Q8IUC8	556 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	CBARP	Q8N350	705 aa	Predicted RBP	10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	SPC24	Q8NBT2	197 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	HTR3C	Q8WXA8	447 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	IMP4	Q96G21	291 aa	Known RBP	10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	TEKT5	Q96M29	485 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	NSMCE3	Q96MG7	304 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	OLFM3	Q96PB7	478 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	DCBLD2	Q96PD2	775 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	PPP1R2P1	Q96PQ5	205 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	GFM1	Q96RP9	751 aa	Known RBP	10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	LYSMD1	Q96S90	227 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	FSD1L	Q9BXM9	530 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	CEP41	Q9BYV8	373 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	STRADB	Q9C0K7	418 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	TMEM168	Q9H0V1	697 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	ABCG8	Q9H221	673 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	STN1	Q9H668	368 aa	Known RBP	10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	GLOD4	Q9HC38	313 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	MAGEE1	Q9HCI5	957 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	FGF22	Q9HCT0	170 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	FAM153A	Q9UHL3	310 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	ZNHIT2	Q9UHR6	403 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	TRHDE	Q9UKU6	1024 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	EFR3B	Q9Y2G0	817 aa		10.33	□□□□□ -0.76
UBR1-207	ENST00000568782	URB1	O60287	2271 aa	Known RBP	10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	hCG_1818297	A0A087WSY0	165 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	RHPN2P1	A8MT19	583 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782		B4DGG1	531 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	APOC4-APOC2	K7ER74	178 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	INPP4B	O15327	924 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	PMPCB	O75439	489 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	KRT37	O76014	449 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	NDST3	O95803	873 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	APOC2	P02655	101 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	SLC4A1	P02730	911 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	CEACAM5	P06731	702 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	IVL	P07476	585 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	SLC2A4	P14672	509 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	PNLIP	P16233	465 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	GM2A	P17900	193 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	PTPN3	P26045	913 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	CDC25B	P30305	580 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	CTNNA1	P35221	906 aa	Known RBP	10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	SPINT3	P49223	89 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	CLDN6	P56747	220 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	GSDMD	P57764	484 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	LRP8	Q14114	963 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	GALNT3	Q14435	633 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	QPCT	Q16769	361 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	C14orf28	Q4W4Y0	310 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	ITPRIPL1	Q6GPH6	555 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	ADAMTSL4	Q6UY14	1074 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	PEX26	Q7Z412	305 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	ARL14	Q8N4G2	192 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	CNTD1	Q8N815	330 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	KY	Q8NBH2	561 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	TTC13	Q8NBP0	860 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	ZDHHC1	Q8WTX9	485 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	UBE2Q2	Q8WVN8	375 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	FGF11	Q92914	225 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	SCAMP4	Q969E2	229 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	TMEM74	Q96NL1	305 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	OR2M4	Q96R27	311 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	ZSCAN5A	Q9BUG6	496 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	RIOK2	Q9BVS4	552 aa	Known RBP	10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	SPATA16	Q9BXB7	569 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	HEMGN	Q9BXL5	484 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	TSGA10	Q9BZW7	698 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	ZMYND15	Q9H091	742 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	GOLPH3	Q9H4A6	298 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	RMI1	Q9H9A7	625 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	HACD3	Q9P035	362 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	AKAP7	Q9P0M2	348 aa	Predicted RBP	10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	LRIT1	Q9P2V4	623 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	SAE1	Q9UBE0	346 aa	Predicted RBP	10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	RSPH14	Q9UHP6	348 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	SUFU	Q9UMX1	484 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	PCDHA3	Q9Y5H8	950 aa		10.32	□□□□□ -0.76
UBR1-207	ENST00000568782	LY6G6E	A0A0G2JKS1	128 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	MIF4GD	A9UHW6	222 aa	Known RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	PJA2	O43164	708 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	KRT86	O43790	486 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	NUDT21	O43809	227 aa	Known RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	ANXA9	O76027	345 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	SLC25A14	O95258	325 aa	Predicted RBP	10.31	□□□□□ -0.76

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