RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CBARPQ8N350 705 aaPredicted RBP12.14□□□□□ -0.47
SF3B3-208ENST00000567250 OR13H1Q8NG92 308 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 BRSK1Q8TDC3 778 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 SMIM14Q96QK8 99 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 ZSCAN5AQ9BUG6 496 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 FAM83DQ9H4H8 585 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 PHPT1Q9NRX4 125 aaPredicted RBP12.14□□□□□ -0.47
SF3B3-208ENST00000567250 GPR27Q9NS67 375 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 CD84Q9UIB8 345 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 CA5BQ9Y2D0 317 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 SPO11Q9Y5K1 396 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 FAM186AA6NE01 2351 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 HEATR9A2RTY3 570 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 H3BM21 787 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 STX7O15400 261 aaKnown RBP12.13□□□□□ -0.47
SF3B3-208ENST00000567250 MYCLP1P12525 358 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-208ENST00000567250 LPOP22079 712 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-208ENST00000567250 TGM1P22735 817 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 SPAM1P38567 509 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 HADHAP40939 763 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 MAGEA6P43360 314 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 OLIG2Q13516 323 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 INPP5AQ14642 412 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 PTPRRQ15256 657 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 ZNF423Q2M1K9 1284 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 INAVAQ3KP66 663 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 HENMT1Q5T8I9 393 aaKnown RBP12.13□□□□□ -0.47
SF3B3-208ENST00000567250 ZNF572Q7Z3I7 529 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-208ENST00000567250 MAATS1Q7Z4T9 603 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 JAMLQ86YT9 394 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 KIAA2013Q8IYS2 634 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 TTC30BQ8N4P2 665 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 MINDY1Q8N5J2 469 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 TRAM1L1Q8N609 369 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 MNS1Q8NEH6 495 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 SPATA4Q8NEY3 305 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 OR52K1Q8NGK4 314 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 NETO1Q8TDF5 533 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 BMFQ96LC9 184 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 ELF4Q99607 663 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-208ENST00000567250 MBNL1Q9NR56 388 aaKnown RBP12.13□□□□□ -0.47
SF3B3-208ENST00000567250 SNX11Q9Y5W9 270 aa12.13□□□□□ -0.47
SF3B3-208ENST00000567250 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.13□□□□□ -0.47
SF3B3-208ENST00000567250 EP300Q09472 2414 aaPredicted RBP12.12□□□□□ -0.47
SF3B3-208ENST00000567250 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 PIEZO1Q92508 2521 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 RIF1Q5UIP0 2472 aaKnown RBP12.12□□□□□ -0.47
SF3B3-208ENST00000567250 A0A0U1RQS6 177 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 SPTY2D1-AS1A0A0U1RR47 76 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 GOLGA8CPA6NN73 597 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 SMAPO00193 183 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 HOXC4P09017 264 aaPredicted RBP12.12□□□□□ -0.47
SF3B3-208ENST00000567250 ZNF883P0CG24 379 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 SDHBP21912 280 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 TRIM23P36406 574 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 ADCY8P40145 1251 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 BLKP51451 505 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 LIMK1P53667 647 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 CDK3Q00526 305 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 C2orf54Q08AI8 447 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 ITGA9Q13797 1035 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 SEPT6Q14141 434 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 KCNJ11Q14654 390 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 HLA-BQ31612 363 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 ARMC3Q5W041 872 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 DENND5AQ6IQ26 1287 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 NLRP9Q7RTR0 991 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 ALYREFQ86V81 257 aaKnown RBP12.12□□□□□ -0.47
SF3B3-208ENST00000567250 HEATR4Q86WZ0 1026 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 PHYKPLQ8IUZ5 450 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 PPIL6Q8IXY8 311 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 SLC22A18ASQ8N1D0 253 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 PLA2G15Q8NCC3 412 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 PPHLN1Q8NEY8 458 aaKnown RBP12.12□□□□□ -0.47
SF3B3-208ENST00000567250 DTX3LQ8TDB6 740 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 BTN2A2Q8WVV5 523 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 WDR92Q96MX6 357 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 RANBP9Q96S59 729 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 KRT12Q99456 494 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 APOOQ9BUR5 198 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 RIOK2Q9BVS4 552 aaKnown RBP12.12□□□□□ -0.47
SF3B3-208ENST00000567250 SPATA16Q9BXB7 569 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 IL22Q9GZX6 179 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 ABCG8Q9H221 673 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 GAREM1Q9H706 876 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
SF3B3-208ENST00000567250 CASS4Q9NQ75 786 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 DNAAF2Q9NVR5 837 aaKnown RBP12.12□□□□□ -0.47
SF3B3-208ENST00000567250 BFARQ9NZS9 450 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 IL17CQ9P0M4 197 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 APPL1Q9UKG1 709 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 NEU2Q9Y3R4 380 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 OR1A2Q9Y585 309 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 MRFAP1Q9Y605 127 aa12.12□□□□□ -0.47
SF3B3-208ENST00000567250 GLYATL1P3A0A0U1RQE8 302 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 A0A1B0GTQ1 180 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.11□□□□□ -0.47
SF3B3-208ENST00000567250 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 K7ESM1 405 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms