RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 DCAF12Q5T6F0 453 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 TIPARPQ7Z3E1 657 aaKnown RBP15.43■□□□□ 0.06
PALB2-205ENST00000567003 SLC37A2Q8TED4 501 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 PSKH2Q96QS6 385 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 TRIM7Q9C029 511 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 GPN2Q9H9Y4 310 aaPredicted RBP15.43■□□□□ 0.06
PALB2-205ENST00000567003 APMAPQ9HDC9 416 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 DACH1Q9UI36 760 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 TUBD1Q9UJT1 453 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 PILRAQ9UKJ1 303 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 SLC17A4Q9Y2C5 497 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 PCYT1BQ9Y5K3 369 aaPredicted RBP15.43■□□□□ 0.06
PALB2-205ENST00000567003 CLEC18AA5D8T8 446 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 B4E171 279 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 ZW10O43264 779 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 HTRA2O43464 458 aaPredicted RBP15.42■□□□□ 0.06
PALB2-205ENST00000567003 MAP3K6O95382 1288 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 SOD1P00441 154 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 IVLP07476 585 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 NR1D1P20393 614 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 TSPAN7P41732 249 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 MAXP61244 160 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 ZNF235Q14590 738 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 RFTN1Q14699 578 aaPredicted RBP15.42■□□□□ 0.06
PALB2-205ENST00000567003 FKBP15Q5T1M5 1219 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 TMCO4Q5TGY1 634 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 TMEM71Q6P5X7 295 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 CLEC18BQ6UXF7 455 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 CYP4V2Q6ZWL3 525 aaPredicted RBP15.42■□□□□ 0.06
PALB2-205ENST00000567003 MCOLN2Q8IZK6 566 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 CBARPQ8N350 705 aaPredicted RBP15.42■□□□□ 0.06
PALB2-205ENST00000567003 CLEC18CQ8NCF0 446 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 RTP4Q96DX8 246 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 SLC45A3Q96JT2 553 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 PCMTD1Q96MG8 357 aaPredicted RBP15.42■□□□□ 0.06
PALB2-205ENST00000567003 OR2M4Q96R27 311 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 ASPSCR1Q9BZE9 553 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 NOD2Q9HC29 1040 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 MAN2B2Q9Y2E5 1009 aa15.42■□□□□ 0.06
PALB2-205ENST00000567003 MRPS18BQ9Y676 258 aaKnown RBP15.42■□□□□ 0.06
PALB2-205ENST00000567003 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.41■□□□□ 0.06
PALB2-205ENST00000567003 TMCO5BA8MYB1 307 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 PYGBP11216 843 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 MAPK9P45984 424 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 GPR1P46091 355 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 SQSTM1Q13501 440 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 NCAPHQ15003 741 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 ERMARDQ5T6L9 678 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 CDKAL1Q5VV42 579 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 HIST2H2BCQ6DN03 193 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 ACAD10Q6JQN1 1059 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 C16orf46Q6P387 395 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 NLGN4XQ8N0W4 816 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 NLGN4YQ8NFZ3 816 aaPredicted RBP15.41■□□□□ 0.06
PALB2-205ENST00000567003 ABHD17AQ96GS6 310 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 AHCYL2Q96HN2 611 aaKnown RBP15.41■□□□□ 0.06
PALB2-205ENST00000567003 CATSPER2Q96P56 530 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 AGAP2Q99490 1192 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 SPRY4Q9C004 299 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 ETNK2Q9NVF9 386 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 DONSONQ9NYP3 566 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 CWC15Q9P013 229 aaKnown RBP15.41■□□□□ 0.06
PALB2-205ENST00000567003 KLHL3Q9UH77 587 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 ANAPC2Q9UJX6 822 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 PRKAB1Q9Y478 270 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 ICE1Q9Y2F5 2266 aa15.41■□□□□ 0.06
PALB2-205ENST00000567003 SOCS5O75159 536 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 PEX11BO96011 259 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 CYP2A6P11509 494 aaPredicted RBP15.4■□□□□ 0.06
PALB2-205ENST00000567003 MIPP30301 263 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 RENBPP51606 427 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 RAB15P59190 212 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 NFATC2Q13469 925 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 MAMLD1Q13495 774 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 DPYSQ14117 519 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 PYCR3Q53H96 274 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 TECPR1Q7Z6L1 1165 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 NEK11Q8NG66 645 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 SCAMP4Q969E2 229 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 SCARF2Q96GP6 870 aaPredicted RBP15.4■□□□□ 0.06
PALB2-205ENST00000567003 NUDCD1Q96RS6 583 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 SLC38A3Q99624 504 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 NUP62CLQ9H1M0 184 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 ABCG8Q9H221 673 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 PHTF1Q9UMS5 762 aa15.4■□□□□ 0.06
PALB2-205ENST00000567003 BLACEA4D250 179 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 K7EM74 188 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 INPP4BO15327 924 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 MTSS1O43312 755 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 PGLSO95336 258 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 NTRK1P04629 796 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 COPB1P53618 953 aaKnown RBP15.39■□□□□ 0.05
PALB2-205ENST00000567003 GPLD1P80108 840 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 MC2RQ01718 297 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 LACTB2Q53H82 288 aaPredicted RBP15.39■□□□□ 0.05
PALB2-205ENST00000567003 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.39■□□□□ 0.05
PALB2-205ENST00000567003 LRRC66Q68CR7 880 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 KDELC2Q7Z4H8 507 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 GALNT13Q8IUC8 556 aa15.39■□□□□ 0.05
PALB2-205ENST00000567003 OR10G6Q8NH81 332 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms