RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 STRIP1Q5VSL9 837 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 CHST3Q7LGC8 479 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 CCDC186Q7Z3E2 898 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 PATL1Q86TB9 770 aaKnown RBP5.09□□□□□ -1.59
CNOT1-209ENST00000566240 CNGA4Q8IV77 575 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 MMP21Q8N119 569 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 GUF1Q8N442 669 aaKnown RBP5.09□□□□□ -1.59
CNOT1-209ENST00000566240 SPATA6LQ8N4H0 392 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 ENGASEQ8NFI3 743 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 TMEM163Q8TC26 289 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 ZFYVE19Q96K21 471 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 CEP295NLQ96MC4 621 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 NUDCD1Q96RS6 583 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 QTRT1Q9BXR0 403 aaKnown RBP5.09□□□□□ -1.59
CNOT1-209ENST00000566240 POLDIP3Q9BY77 421 aaKnown RBP5.09□□□□□ -1.59
CNOT1-209ENST00000566240 ESRP2Q9H6T0 727 aaKnown RBP5.09□□□□□ -1.59
CNOT1-209ENST00000566240 GDE1Q9NZC3 331 aa5.09□□□□□ -1.59
CNOT1-209ENST00000566240 TRBC2A0A5B9 178 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 GAGE12JA6NER3 117 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 MDM4O15151 490 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 PLRG1O43660 514 aaKnown RBP5.08□□□□□ -1.6
CNOT1-209ENST00000566240 IFNA2P01563 188 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 CYC1P08574 325 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 CCDC175P0C221 793 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 VDRP11473 427 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 GPTP24298 496 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 HOXC9P31274 260 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 MSH2P43246 934 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 MMP14P50281 582 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 ZXDAP98168 799 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 NHLH1Q02575 133 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 PPARDQ03181 441 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 INPP5JQ15735 1006 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-209ENST00000566240 DUSP6Q16828 381 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 GGNBP1Q5YKI7 109 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 METTL2BQ6P1Q9 378 aaKnown RBP5.08□□□□□ -1.6
CNOT1-209ENST00000566240 SLC16A12Q6ZSM3 486 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 TAOK1Q7L7X3 1001 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 SDCCAG8Q86SQ7 713 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-209ENST00000566240 ANKRD13BQ86YJ7 626 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 ARRDC2Q8TBH0 407 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 METTL2AQ96IZ6 378 aaKnown RBP5.08□□□□□ -1.6
CNOT1-209ENST00000566240 CDRT15Q96T59 188 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 SEMA4CQ9C0C4 833 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 PIGMQ9H3S5 423 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 OPA3Q9H6K4 179 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 RIOX1Q9H6W3 641 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 EPB41L5Q9HCM4 733 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 SELENONQ9NZV5 590 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 RCOR1Q9UKL0 485 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 COG5Q9UP83 839 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 ZNF148Q9UQR1 794 aa5.08□□□□□ -1.6
CNOT1-209ENST00000566240 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-209ENST00000566240 WIPF3A6NGB9 483 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 CNOT3O75175 753 aaKnown RBP5.07□□□□□ -1.6
CNOT1-209ENST00000566240 ICAM1P05362 532 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 IFNAR1P17181 557 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 MAOAP21397 527 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 CTNNA1P35221 906 aaKnown RBP5.07□□□□□ -1.6
CNOT1-209ENST00000566240 ACVRL1P37023 503 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 PIGAP37287 484 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 COMPP49747 757 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-209ENST00000566240 CCR3P51677 355 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 ST3GAL1Q11201 340 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 GRIK2Q13002 908 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 MTX1Q13505 466 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 CAMK2DQ13557 499 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 IL11RAQ14626 422 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 ZNF805Q5CZA5 627 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 COLEC12Q5KU26 742 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 Q5PR19 223 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 SLC18B1Q6NT16 456 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 CACNA2D4Q7Z3S7 1137 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 DNAJB7Q7Z6W7 309 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-209ENST00000566240 PALB2Q86YC2 1186 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 CEP97Q8IW35 865 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 GPATCH11Q8N954 259 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 VMP1Q96GC9 406 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 RTN4RQ9BZR6 473 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 KCNN2Q9H2S1 579 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 MMP27Q9H306 513 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 R3HDMLQ9H3Y0 253 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 PPP1R3EQ9H7J1 279 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 GRPEL1Q9HAV7 217 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 ACSS1Q9NUB1 689 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-209ENST00000566240 FLRT1Q9NZU1 646 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 CRNNQ9UBG3 495 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-209ENST00000566240 UBA2Q9UBT2 640 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-209ENST00000566240 DNAJB4Q9UDY4 337 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 OR14J1Q9UGF5 321 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 OSGIN1Q9UJX0 560 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 ANAPC5Q9UJX4 755 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 ING1Q9UK53 422 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-209ENST00000566240 PCDHA12Q9UN75 941 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 RAI2Q9Y5P3 530 aa5.07□□□□□ -1.6
CNOT1-209ENST00000566240 CPED1A4D0V7 1026 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 ADAM10O14672 748 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 SMAD9O15198 467 aaKnown RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 RSL1D1O76021 490 aaKnown RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 BCL10O95999 233 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms