RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 ELP6Q0PNE2 266 aa30.49■■■□□ 2.47
CTCF-203ENST00000566078 CNTN1Q12860 1018 aa30.49■■■□□ 2.47
CTCF-203ENST00000566078 ZC3HC1Q86WB0 502 aaKnown RBP30.49■■■□□ 2.47
CTCF-203ENST00000566078 CBARPQ8N350 705 aaPredicted RBP30.49■■■□□ 2.47
CTCF-203ENST00000566078 VPS39Q96JC1 886 aa30.49■■■□□ 2.47
CTCF-203ENST00000566078 FAM96AQ9H5X1 160 aa30.49■■■□□ 2.47
CTCF-203ENST00000566078 PKD2L2Q9NZM6 624 aa30.49■■■□□ 2.47
CTCF-203ENST00000566078 ACTL7BQ9Y614 415 aa30.49■■■□□ 2.47
CTCF-203ENST00000566078 SLC30A1Q9Y6M5 507 aa30.49■■■□□ 2.47
CTCF-203ENST00000566078 TRIOO75962 3097 aa30.49■■■□□ 2.47
CTCF-203ENST00000566078 C19orf67A6NJJ6 358 aa30.48■■■□□ 2.47
CTCF-203ENST00000566078 POLR3GO15318 223 aaPredicted RBP30.48■■■□□ 2.47
CTCF-203ENST00000566078 CREB1P16220 341 aa30.48■■■□□ 2.47
CTCF-203ENST00000566078 LEPRP48357 1165 aaKnown RBP30.48■■■□□ 2.47
CTCF-203ENST00000566078 SDCCAG8Q86SQ7 713 aaPredicted RBP30.48■■■□□ 2.47
CTCF-203ENST00000566078 C4orf33Q8N1A6 199 aa30.48■■■□□ 2.47
CTCF-203ENST00000566078 FAM76AQ8TAV0 307 aa30.48■■■□□ 2.47
CTCF-203ENST00000566078 SERAC1Q96JX3 654 aa30.48■■■□□ 2.47
CTCF-203ENST00000566078 APPL1Q9UKG1 709 aa30.48■■■□□ 2.47
CTCF-203ENST00000566078 GLYATL1P3A0A0U1RQE8 302 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 GOLGA8CPA6NN73 597 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 GAPDHSO14556 408 aaPredicted RBP30.47■■■□□ 2.47
CTCF-203ENST00000566078 PRAMEF1O95521 474 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 ELFN1P0C7U0 828 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 C5AR1P21730 350 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 DRD3P35462 400 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 HSF5Q4G112 596 aaPredicted RBP30.47■■■□□ 2.47
CTCF-203ENST00000566078 ZNF789Q5FWF6 425 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 EOGTQ5NDL2 527 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 PSAPL1Q6NUJ1 521 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 HSD11B1LQ7Z5J1 315 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 GALNT7Q86SF2 657 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 AADATQ8N5Z0 425 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 GPR26Q8NDV2 337 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 KLF6Q99612 283 aaPredicted RBP30.47■■■□□ 2.47
CTCF-203ENST00000566078 IL26Q9NPH9 171 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 FBXL21Q9UKT6 434 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 SRP72O76094 671 aaKnown RBP30.47■■■□□ 2.47
CTCF-203ENST00000566078 HAUS5O94927 633 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 SPINT3P49223 89 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 CDKN1CP49918 316 aaPredicted RBP30.47■■■□□ 2.47
CTCF-203ENST00000566078 PPP2R2AP63151 447 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 CACNG1Q06432 222 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 TYSND1Q2T9J0 566 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 PIP5KL1Q5T9C9 394 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 RFLNAQ6ZTI6 216 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 DCLK2Q8N568 766 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 SMC6Q96SB8 1091 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 SELENOSQ9BQE4 189 aa30.47■■■□□ 2.47
CTCF-203ENST00000566078 WRAP53Q9BUR4 548 aaKnown RBP30.47■■■□□ 2.47
CTCF-203ENST00000566078 MKRN2Q9H000 416 aaKnown RBP30.47■■■□□ 2.47
CTCF-203ENST00000566078 MTO1Q9Y2Z2 717 aaKnown RBP30.47■■■□□ 2.47
CTCF-203ENST00000566078 GOLGA8RI6L899 631 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 AREL1O15033 823 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 GPR39O43194 453 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 S1PR4O95977 384 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 PMLP29590 882 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 CNSTQ6PJW8 725 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 PIANPQ8IYJ0 282 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 CNPY4Q8N129 248 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 RAB7BQ96AH8 199 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 SLC6A17Q9H1V8 727 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 MMP17Q9ULZ9 603 aa30.46■■■□□ 2.47
CTCF-203ENST00000566078 BRAFP15056 766 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 KRT4P19013 534 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 PTPN5P54829 565 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 ZDHHC20Q5W0Z9 365 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 LIPIQ6XZB0 460 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 PLEKHG4BQ96PX9 1271 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 GPR22Q99680 433 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 CD248Q9HCU0 757 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 WNT16Q9UBV4 365 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 CD84Q9UIB8 345 aa30.45■■■□□ 2.47
CTCF-203ENST00000566078 KRBA1A5PL33 1030 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 NEMP1O14524 444 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 TPP1O14773 563 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 RFPL1O75677 317 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 ITGALP20701 1170 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 LIG3P49916 1009 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 DNAJC3Q13217 504 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 AARS2Q5JTZ9 985 aaKnown RBP30.44■■■□□ 2.46
CTCF-203ENST00000566078 TIFABQ6ZNK6 161 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 TAS2R42Q7RTR8 314 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 SNX20Q7Z614 316 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 TMPRSS6Q8IU80 811 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 HDDC3Q8N4P3 179 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 TBRG4Q969Z0 631 aaKnown RBP eCLIP30.44■■■□□ 2.463e-10■■■■■ 47.1
CTCF-203ENST00000566078 INTS10Q9NVR2 710 aaKnown RBP30.44■■■□□ 2.46
CTCF-203ENST00000566078 TRPM6Q9BX84 2022 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 A0A1W2PP55 124 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 H0Y858 1186 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 DNTTP04053 509 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 ALDOAP04075 364 aaKnown RBP30.44■■■□□ 2.46
CTCF-203ENST00000566078 PYGBP11216 843 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 CHRNB1P11230 501 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 ETV3P41162 512 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 SERPINB8P50452 374 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 PPARDQ03181 441 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 CHRNA6Q15825 494 aa30.44■■■□□ 2.46
CTCF-203ENST00000566078 AGBL4Q5VU57 503 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms