RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 KCNJ11Q14654 390 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CTF1Q16619 201 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 C1orf186Q6ZWK4 172 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 VN1R5Q7Z5H4 357 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CAND1Q86VP6 1230 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 LRRC47Q8N1G4 583 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 METTL4Q8N3J2 472 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CARNMT1Q8N4J0 409 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CCDC185Q8N715 623 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 RDH13Q8NBN7 331 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PAPD5Q8NDF8 572 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 RSAD2Q8WXG1 361 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MRPL48Q96GC5 212 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 WRNIP1Q96S55 665 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 C11orf70Q9BRQ4 267 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 FTHL17Q9BXU8 183 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 AGPAT4Q9NRZ5 378 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NSMCE4AQ9NXX6 385 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 H2AFY2Q9P0M6 372 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 FAM25AB3EWG3 89 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 FAM25CB3EWG5 89 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 FAM25GB3EWG6 89 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 AURKAO14965 403 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HPRP00739 348 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CBLP22681 906 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ABCG1P45844 678 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SRP54P61011 504 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 MRPS10P82664 201 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 DPY19L1Q2PZI1 675 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZBTB49Q6ZSB9 765 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 C15orf52Q6ZUT6 534 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 BEND5Q7L4P6 421 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MAML2Q8IZL2 1156 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 OXR1Q8N573 874 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 FAM71DQ8N9W8 422 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ARL5BQ96KC2 179 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HSFY1Q96LI6 401 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HARBI1Q96MB7 349 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SIGLEC11Q96RL6 698 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SERHL2Q9H4I8 314 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TM9SF3Q9HD45 589 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SERHLQ9NQF3 203 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 DTLQ9NZJ0 730 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SPATA2Q9UM82 520 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TRAPPC4Q9Y296 219 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HIF3AQ9Y2N7 669 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PCDHB12Q9Y5F1 795 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 KCPQ6ZWJ8 1503 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MRASO14807 208 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 AVILO75366 819 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 KDM4BO94953 1096 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 RPS7P62081 194 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZNF181Q2M3W8 571 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GLRA4Q5JXX5 417 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 UBXN11Q5T124 520 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 INTS11Q5TA45 600 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 TATDN1Q6P1N9 297 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 OR4M2Q8NGB6 313 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 OR52H1Q8NGJ2 320 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 OR10T2Q8NGX3 314 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LHFPL5Q8TAF8 219 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZSCAN18Q8TBC5 510 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 FAM167AQ96KS9 214 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NT5C1BQ96P26 610 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USB1Q9BQ65 265 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 MCMBPQ9BTE3 642 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 KCNN2Q9H2S1 579 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 AGPAT3Q9NRZ7 376 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SRP68Q9UHB9 627 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 RUVBL1Q9Y265 456 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 A0A1W2PRG6 482 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HEATR9A2RTY3 570 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L3A6NCW0 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L4A6NCW7 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L15C9J2P7 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L10C9JJH3 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L13C9JLJ4 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L11C9JVI0 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L18D6R9N7 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L22D6RA61 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L17D6RBQ6 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L19D6RCP7 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L20D6RJB6 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 STX16-NPEPL1H3BU86 382 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 BTN3A3O00478 584 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TRIM24O15164 1050 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CAPN5O15484 640 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 ARHGEF15O94989 841 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L8P0C7I0 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HOXB3P14651 431 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 ACO1P21399 889 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 ARNTP27540 789 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HTR1BP28222 390 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ALDH7A1P49419 539 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 BCAMP50895 628 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CTSWP56202 376 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MYL6P60660 151 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MGAT3Q09327 533 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L24Q0WX57 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 STX5Q13190 355 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms