RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 TM4SF5O14894 197 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 PRAMEF2O60811 474 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 RECQL5O94762 991 aaPredicted RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 DLGAP3O95886 979 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 IGHEP01854 428 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 RLN1P04808 185 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CCL5P13501 91 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ETS2P15036 469 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 EZRP15311 586 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 ITGB6P18564 788 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ITIH2P19823 946 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 DGKAP23743 735 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 LTBRP36941 435 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 PSMB10P40306 273 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 IL12RB1P42701 662 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CTSOP43234 321 aaPredicted RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 FNTAP49354 379 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ARFIP2P53365 341 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 GALCP54803 685 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 GSDMDP57764 484 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 PHC1P78364 1004 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 SCGB2A2Q13296 93 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 SNTB2Q13425 540 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 ADAM9Q13443 819 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 PCSK7Q16549 785 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 NADK2Q4G0N4 442 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 FBXO43Q4G163 708 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 C4orf17Q53FE4 359 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 HERC4Q5GLZ8 1057 aaPredicted RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 BEX5Q5H9J7 111 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ZNF484Q5JVG2 852 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CLEC9AQ6UXN8 241 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ESPNLQ6ZVH7 1005 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 TRMT11Q7Z4G4 463 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 SPATA19Q7Z5L4 167 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 KBTBD6Q86V97 674 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 SIAH1Q8IUQ4 282 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 OFCC1Q8IZS5 231 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 MRPL43Q8N983 215 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 SETD9Q8NE22 299 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 MCPH1Q8NEM0 835 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 OR52E1Q8NGJ3 308 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 NFKBIDQ8NI38 313 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CD99L2Q8TCZ2 262 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 HEXDCQ8WVB3 486 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 SCFD1Q8WVM8 642 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 RLN3Q8WXF3 142 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 INTS12Q96CB8 462 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 NXNL1Q96CM4 212 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ELMOD3Q96FG2 381 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 PTCHD1Q96NR3 888 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 NR1H4Q96RI1 486 aaPredicted RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 LPIN3Q9BQK8 851 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 C11orf70Q9BRQ4 267 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 GTPBP2Q9BX10 602 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 NKX2-4Q9H2Z4 354 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 SOX17Q9H6I2 414 aaPredicted RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 UNKLQ9H9P5 680 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 PRDM8Q9NQV8 689 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 RAD18Q9NS91 495 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 FAM118AQ9NWS6 357 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 TMEM161AQ9NX61 479 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CLDND1Q9NY35 253 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 GTSE1Q9NYZ3 720 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 NDUFAF4Q9P032 175 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 TNFRSF10DQ9UBN6 386 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 GGA2Q9UJY4 613 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 TELO2Q9Y4R8 837 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CUL9Q8IWT3 2517 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 RALGAPA2Q2PPJ7 1873 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 EDDM13A0A1B0GTR0 161 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 PRAMEF22A3QJZ6 481 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 IGF2BP3O00425 579 aaKnown RBP eCLIP3.08□□□□□ -1.92
CHD9-216ENST00000565803 OGTO15294 1046 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 LRRTM2O43300 516 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 STRNO43815 780 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 EIF2S1P05198 315 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 ABHD2P08910 425 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 PTPRAP18433 802 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ITIH1P19827 911 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CYP2B6P20813 491 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 LORP23490 312 aaPredicted RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 EPHA8P29322 1005 aaPredicted RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 CORO1AP31146 461 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 ENTPD1P49961 510 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 RAD23BP54727 409 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 POLE2P56282 527 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 WDR4P57081 412 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 CABP4P57796 275 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 PTH1RQ03431 593 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 MERTKQ12866 999 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 BOP1Q14137 746 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 PUM1Q14671 1186 aaKnown RBP eCLIP3.08□□□□□ -1.925e-7■■□□□ 11.8
CHD9-216ENST00000565803 IFI16Q16666 785 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 CCDC142Q17RM4 750 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 KIZQ2M2Z5 673 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ZNF667Q5HYK9 610 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 UBAP2Q5T6F2 1119 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 ARMC12Q5T9G4 340 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 WLSQ5T9L3 541 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms