RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 LRIF1Q5T3J3 769 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 SEPT14Q6ZU15 432 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 ENOSF1Q7L5Y1 443 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 ZC3HC1Q86WB0 502 aaKnown RBP4.51□□□□□ -1.69
CHD9-215ENST00000565442 TICAM1Q8IUC6 712 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 TAGAPQ8N103 731 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 PRR26Q8N8Z3 221 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 CCDC89Q8N998 374 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 NEXN-AS1Q8NBZ9 246 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 SGCDQ92629 289 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 TXNDC15Q96J42 360 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 HARBI1Q96MB7 349 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 MXD3Q9BW11 206 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 KRTAP4-4Q9BYR3 166 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 PLK3Q9H4B4 646 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 MDFICQ9P1T7 246 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 SLC9A2Q9UBY0 812 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 FBXL17Q9UF56 701 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 NENFQ9UMX5 172 aa4.51□□□□□ -1.69
CHD9-215ENST00000565442 SCAMP1O15126 338 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 FIBPO43427 364 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 MAOAP21397 527 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 HOXD3P31249 432 aaPredicted RBP4.5□□□□□ -1.69
CHD9-215ENST00000565442 HOXA11P31270 313 aaPredicted RBP4.5□□□□□ -1.69
CHD9-215ENST00000565442 HNRNPH1P31943 449 aaKnown RBP4.5□□□□□ -1.69
CHD9-215ENST00000565442 CFAP58Q5T655 872 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 DAB2IPQ5VWQ8 1189 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 GGNBP1Q5YKI7 109 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 SIGIRRQ6IA17 410 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 JADE1Q6IE81 842 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 PLEKHA7Q6IQ23 1121 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 METTL2BQ6P1Q9 378 aaKnown RBP4.5□□□□□ -1.69
CHD9-215ENST00000565442 DPPA4Q7L190 304 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 DSELQ8IZU8 1212 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 NME8Q8N427 588 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 HJURPQ8NCD3 748 aaPredicted RBP4.5□□□□□ -1.69
CHD9-215ENST00000565442 C1orf131Q8NDD1 294 aaKnown RBP4.5□□□□□ -1.69
CHD9-215ENST00000565442 ADAMTS14Q8WXS8 1223 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 RND1Q92730 232 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 PGAM5Q96HS1 289 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 METTL2AQ96IZ6 378 aaKnown RBP4.5□□□□□ -1.69
CHD9-215ENST00000565442 LRFN5Q96NI6 719 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 ACOX2Q99424 681 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 HAUS8Q9BT25 410 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 SF3B5Q9BWJ5 86 aaKnown RBP4.5□□□□□ -1.69
CHD9-215ENST00000565442 DCLK3Q9C098 648 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 CNGB3Q9NQW8 809 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 HIF1ANQ9NWT6 349 aa4.5□□□□□ -1.69
CHD9-215ENST00000565442 hDV102S1A0JD36 115 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 WNT9BO14905 357 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 ATP2A1O14983 1001 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 HS6ST1O60243 411 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 JRKO75564 520 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 TPPPO94811 219 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 STARD3NLO95772 234 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 CENPBP07199 599 aaPredicted RBP4.49□□□□□ -1.69
CHD9-215ENST00000565442 TMEM11P17152 192 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 C21orf33P30042 268 aaPredicted RBP4.49□□□□□ -1.69
CHD9-215ENST00000565442 CDC25AP30304 524 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 ARRB2P32121 409 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 STX2P32856 288 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 AMTP48728 403 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 PSMC6P62333 389 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 ACSM2AQ08AH3 577 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 Q0VFX4 171 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 AIMP2Q13155 320 aaKnown RBP4.49□□□□□ -1.69
CHD9-215ENST00000565442 KCTD2Q14681 263 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 ADIPOQQ15848 244 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 RAB41Q5JT25 222 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 PLEKHS1Q5SXH7 462 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 ACSM2BQ68CK6 577 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 ZNF549Q6P9A3 640 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 SLC36A4Q6YBV0 504 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 C18orf65Q6ZTR6 163 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 PELI3Q8N2H9 469 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 OR14A16Q8NHC5 309 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 SAT2Q96F10 170 aaPredicted RBP4.49□□□□□ -1.69
CHD9-215ENST00000565442 THOC3Q96J01 351 aaKnown RBP4.49□□□□□ -1.69
CHD9-215ENST00000565442 CAMK1GQ96NX5 476 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 OR2A14Q96R47 310 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 GAD1Q99259 594 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 KXD1Q9BQD3 176 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 ACSS1Q9NUB1 689 aaPredicted RBP4.49□□□□□ -1.69
CHD9-215ENST00000565442 TXLNGQ9NUQ3 528 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 OGFRQ9NZT2 677 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 CWC15Q9P013 229 aaKnown RBP4.49□□□□□ -1.69
CHD9-215ENST00000565442 RPS6KA6Q9UK32 745 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 TTC7AQ9ULT0 858 aaPredicted RBP4.49□□□□□ -1.69
CHD9-215ENST00000565442 MYO6Q9UM54 1294 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 TMEM5Q9Y2B1 443 aa4.49□□□□□ -1.69
CHD9-215ENST00000565442 TCF20Q9UGU0 1960 aaKnown RBP4.48□□□□□ -1.69
CHD9-215ENST00000565442 LINC01553A4QN01 128 aa4.48□□□□□ -1.69
CHD9-215ENST00000565442 B4DLN1 442 aa4.48□□□□□ -1.69
CHD9-215ENST00000565442 CTDSP2O14595 271 aa4.48□□□□□ -1.69
CHD9-215ENST00000565442 NDUFS7O75251 213 aa4.48□□□□□ -1.69
CHD9-215ENST00000565442 BEST1O76090 585 aa4.48□□□□□ -1.69
CHD9-215ENST00000565442 CH25HO95992 272 aa4.48□□□□□ -1.69
CHD9-215ENST00000565442 TUBBP07437 444 aa4.48□□□□□ -1.69
CHD9-215ENST00000565442 SRPRAP08240 638 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms