RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FAM25GB3EWG6 89 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 LSM1O15116 133 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 OPHN1O60890 802 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PAEPP09466 180 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MYL2P10916 166 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CKBP12277 381 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 BCAT1P54687 386 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MRPS15P82914 257 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 PPP1R8Q12972 351 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 NDUFA5Q16718 116 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 FAM187BQ17R55 369 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CACHD1Q5VU97 1274 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RETSATQ6NUM9 610 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RGMBQ6NW40 437 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TXNDC11Q6PKC3 985 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 VSTM1Q6UX27 236 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RAPH1Q70E73 1250 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 HERC6Q8IVU3 1022 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 FITM2Q8N6M3 262 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MINDY2Q8NBR6 621 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ACTRT1Q8TDG2 376 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ADAMTS18Q8TE60 1221 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ELMO1Q92556 727 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 NSMCE3Q96MG7 304 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SERPINB11Q96P15 392 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 HAPLN3Q96S86 360 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 GINS4Q9BRT9 223 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 IGFLR1Q9H665 355 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MANSC4A6NHS7 340 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 NME6O75414 186 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 CHRNGP07510 517 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 HAPLN1P10915 354 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 CYP2A6P11509 494 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 GPD1P21695 349 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CA5AP35218 305 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 FAUP35544 74 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 WASP42768 502 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 MAP2K5Q13163 448 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 BOP1Q14137 746 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 GRB14Q14449 540 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SEMA3AQ14563 771 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SH3D19Q5HYK7 790 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 MTDHQ86UE4 582 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 PM20D2Q8IYS1 436 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SPDYE1Q8NFV5 336 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 PGAP3Q96FM1 320 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 FAM117AQ9C073 453 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CHST10O43529 356 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ARHGEF15O94989 841 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 FYNP06241 537 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CCDC166P0CW27 439 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ZNF132P52740 706 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CLLU1OSQ5K130 101 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 C6orf10Q5SRN2 563 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 DEPDC1Q5TB30 811 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 RTL6Q6ICC9 239 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SLC27A1Q6PCB7 646 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 RFLNAQ6ZTI6 216 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TEX29Q8N6K0 151 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ZMIZ2Q8NF64 920 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TCF25Q9BQ70 676 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 C3orf14Q9HBI5 128 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 STOML2Q9UJZ1 356 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ZFP37Q9Y6Q3 630 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 MYO7AQ13402 2215 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TGDSO95455 350 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 INHAP05111 366 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 FCER2P06734 321 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 THP07101 528 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 IL10P22301 178 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 STOMP27105 288 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 MAGEA8P43361 318 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CLK3P49761 638 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 ATP1A4Q13733 1029 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 LPIN1Q14693 890 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 THEMIS2Q5TEJ8 643 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 AP1ARQ63HQ0 302 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 DENND1CQ8IV53 801 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SHCBP1Q8NEM2 672 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TIFAQ96CG3 184 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TUBGCP5Q96RT8 1024 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TNKS2Q9H2K2 1166 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ABHD16BQ9H3Z7 469 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PRELID3BQ9Y3B1 194 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ISPDA4D126 451 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 RGS5O15539 181 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SEPT4O43236 478 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 LATO43561 262 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SNAP91O60641 907 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 LY86O95711 162 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PPP2R2AP63151 447 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 HIBCHQ6NVY1 386 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 RCOR2Q8IZ40 523 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 C9orf43Q8TAL5 461 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 ZSCAN18Q8TBC5 510 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 CNBD2Q96M20 576 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SPON2Q9BUD6 331 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PLA2G4CQ9UP65 541 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PRKAB1Q9Y478 270 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 WASH3PC4AMC7 463 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms