RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 LRRC57Q8N9N7 239 aa18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 SPATA22Q8NHS9 363 aa18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 HTR3CQ8WXA8 447 aa18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 ZCCHC14Q8WYQ9 949 aaKnown RBP18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 VAT1Q99536 393 aa18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 FERMT1Q9BQL6 677 aa18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 OSBPL8Q9BZF1 889 aa18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 KLHL8Q9P2G9 620 aaPredicted RBP18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 GULP1Q9UBP9 304 aa18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 TRIM10Q9UDY6 481 aa18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 U3KQA8 63 aa18.3■□□□□ 0.52
SYNGR3-204ENST00000564642 EME2A4GXA9 379 aaPredicted RBP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 TRABD2BA6NFA1 517 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 MT-CYBP00156 380 aaPredicted RBP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 TNNT3P45378 269 aaPredicted RBP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 WASHC5Q12768 1159 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 TARDBPQ13148 414 aaKnown RBP eCLIP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 SLC14A2Q15849 920 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 KCTD16Q68DU8 428 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 EFL1Q7Z2Z2 1120 aaKnown RBP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 TAF8Q7Z7C8 310 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 UBL4BQ8N7F7 174 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 PDCD7Q8N8D1 485 aaKnown RBP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 SCAMP4Q969E2 229 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 TADA1Q96BN2 335 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 QKIQ96PU8 341 aaKnown RBP eCLIP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 CCDC86Q9H6F5 360 aaKnown RBP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 SUDS3Q9H7L9 328 aaPredicted RBP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 CARS2Q9HA77 564 aaKnown RBP18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 UBP1Q9NZI7 540 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 PKD2L2Q9NZM6 624 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 SIRPGQ9P1W8 387 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 ZMIZ1Q9ULJ6 1067 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 PADI4Q9UM07 663 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 GPR34Q9UPC5 381 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 CLCA2Q9UQC9 943 aa18.29■□□□□ 0.52
SYNGR3-204ENST00000564642 OPA1O60313 960 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 PMPCBO75439 489 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 TJP3O95049 919 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 MT-CO3P00414 261 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 PTMAP06454 111 aaKnown RBP18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 CEACAM5P06731 702 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 SPINT3P49223 89 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 NOMO1Q15155 1222 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 GUSBP11Q6P575 273 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 SLC35F3Q8IY50 421 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 MAPK15Q8TD08 544 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 TRIB3Q96RU7 358 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 RIOK2Q9BVS4 552 aaKnown RBP18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 TMEM168Q9H0V1 697 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 ZFYVE1Q9HBF4 777 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 MAGEE1Q9HCI5 957 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 FAM153AQ9UHL3 310 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 TRHDEQ9UKU6 1024 aa18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 GOLGA4Q13439 2230 aaKnown RBP18.28■□□□□ 0.52
SYNGR3-204ENST00000564642 A0A0U1RQJ8 604 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 MIF4GDA9UHW6 222 aaKnown RBP18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 NDST3O95803 873 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 PYGMP11217 842 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 NFKB1P19838 968 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 CD68P34810 354 aaPredicted RBP18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 PTPN7P35236 360 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 OTUD4Q01804 1114 aaKnown RBP18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 CAMK2BQ13554 666 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 ADAMTSL4Q6UY14 1074 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 LYSMD3Q7Z3D4 306 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 ZNF567Q8N184 647 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 CACTIN-AS1Q8N1I8 211 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 ARL10Q8N8L6 244 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 FAM46DQ8NEK8 389 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 ACTL9Q8TC94 416 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 ALG3Q92685 438 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 NAT6Q93015 286 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 HIC2Q96JB3 615 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 SRPK1Q96SB4 655 aaKnown RBP18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 FRMD8Q9BZ67 464 aaPredicted RBP18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 TSGA10Q9BZW7 698 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 FAM83DQ9H4H8 585 aa18.27■□□□□ 0.52
SYNGR3-204ENST00000564642 RGSL1A5PLK6 1076 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 INPP4BO15327 924 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 FTCDO95954 541 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 SOD1P00441 154 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 PIRTP0C851 137 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 RBL1P28749 1068 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 GNPDA1P46926 289 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 EIF3EP60228 445 aaKnown RBP18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 AADACL2Q6P093 401 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 DOK6Q6PKX4 331 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 RNF10Q8N5U6 811 aaKnown RBP18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 MDM1Q8TC05 714 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 FCRL5Q96RD9 977 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 AGAP2Q99490 1192 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 HERPUD2Q9BSE4 406 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 GPR63Q9BZJ6 419 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 DPEP2Q9H4A9 486 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 RSPH14Q9UHP6 348 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 SUFUQ9UMX1 484 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 PACSIN2Q9UNF0 486 aaPredicted RBP18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 SHOC2Q9UQ13 582 aa18.26■□□□□ 0.51
SYNGR3-204ENST00000564642 SPEGQ15772 3267 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms