RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 C1QTNF5Q9BXJ0 243 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 AGXT2Q9BYV1 514 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 IFIH1Q9BYX4 1025 aaKnown RBP4.71□□□□□ -1.66
UBR1-205ENST00000564540 USP44Q9H0E7 712 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 PLEKHA5Q9HAU0 1116 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 SEBOXQ9HB31 216 aaPredicted RBP4.71□□□□□ -1.66
UBR1-205ENST00000564540 SLC13A4Q9UKG4 626 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 POU2F3Q9UKI9 436 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 GJD2Q9UKL4 321 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 INTS6Q9UL03 887 aaKnown RBP4.71□□□□□ -1.66
UBR1-205ENST00000564540 MKLN1Q9UL63 735 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 LOXL2Q9Y4K0 774 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 CAPN7Q9Y6W3 813 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 GREB1LQ9C091 1923 aaPredicted RBP4.71□□□□□ -1.66
UBR1-205ENST00000564540 UTYO14607 1347 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 ASPDHA6ND91 283 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 GOLGA6L9A6NEM1 432 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 P2RY10O00398 339 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 EGFP01133 1207 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 ATP1A1P05023 1023 aaKnown RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 HOXB5P09067 269 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 RRM1P23921 792 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 GNL1P36915 607 aaPredicted RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 IL15P40933 162 aaPredicted RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 HARS2P49590 506 aaKnown RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 ISL1P61371 349 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 PDE1BQ01064 536 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 DRAP1Q14919 205 aaPredicted RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 GSTA3Q16772 222 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 CCDC96Q2M329 555 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 STXBP5Q5T5C0 1151 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 MARK2Q7KZI7 788 aaKnown RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.7□□□□□ -1.66
UBR1-205ENST00000564540 RNF113BQ8IZP6 322 aaKnown RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 CNTROBQ8N137 903 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 PCDH20Q8N6Y1 951 aaKnown RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 LRRC8CQ8TDW0 803 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 RHBDF1Q96CC6 855 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 ORAI1Q96D31 301 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 CDCA5Q96FF9 252 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 PPP1R13BQ96KQ4 1090 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 PGLYRP2Q96PD5 576 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 NR1H4Q96RI1 486 aaPredicted RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 KIF9Q9HAQ2 790 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 ABCF3Q9NUQ8 709 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 PDP2Q9P2J9 529 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 ERRFI1Q9UJM3 462 aaPredicted RBP4.7□□□□□ -1.66
UBR1-205ENST00000564540 OR2W1Q9Y3N9 320 aa4.7□□□□□ -1.66
UBR1-205ENST00000564540 TTC36A6NLP5 189 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 EIF3JO75822 258 aaKnown RBP4.69□□□□□ -1.66
UBR1-205ENST00000564540 EPHA8P29322 1005 aaPredicted RBP4.69□□□□□ -1.66
UBR1-205ENST00000564540 USP8P40818 1118 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 USP41Q3LFD5 358 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 C6orf141Q5SZD1 244 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 KMT5CQ86Y97 462 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 PSPC1Q8WXF1 523 aaKnown RBP4.69□□□□□ -1.66
UBR1-205ENST00000564540 GTF3C6Q969F1 213 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 ZUFSPQ96AP4 578 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 SAAL1Q96ER3 474 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 PSMD1Q99460 953 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 FBRSL1Q9HCM7 1045 aaKnown RBP4.69□□□□□ -1.66
UBR1-205ENST00000564540 KDM3AQ9Y4C1 1321 aa4.69□□□□□ -1.66
UBR1-205ENST00000564540 FAM172BPA6NC97 362 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 LILRA5A6NI73 299 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 A6NLC8 198 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 PRSS47A8MTI9 375 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 ERVV-2B6SEH9 535 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 FGF17O60258 216 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 IL7RP16871 459 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 PIP4K2AP48426 406 aaPredicted RBP4.68□□□□□ -1.66
UBR1-205ENST00000564540 CSNK2A1P68400 391 aaPredicted RBP4.68□□□□□ -1.66
UBR1-205ENST00000564540 PHEXP78562 749 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 DMP1Q13316 513 aaPredicted RBP4.68□□□□□ -1.66
UBR1-205ENST00000564540 KRTAP27-1Q3LI81 207 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 ACCSLQ4AC99 568 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 SIGIRRQ6IA17 410 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 TRNP1Q6NT89 227 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 ZNF449Q6P9G9 518 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 SLC26A9Q7LBE3 791 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 TRMT1LQ7Z2T5 733 aaKnown RBP4.68□□□□□ -1.66
UBR1-205ENST00000564540 ARMC8Q8IUR7 673 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 BEST3Q8N1M1 668 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 CSNK2A3Q8NEV1 391 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 EIF2AK1Q9BQI3 630 aaKnown RBP4.68□□□□□ -1.66
UBR1-205ENST00000564540 TMEM47Q9BQJ4 181 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 TRMT61BQ9BVS5 477 aaKnown RBP4.68□□□□□ -1.66
UBR1-205ENST00000564540 ASAH2Q9NR71 780 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 ACSS1Q9NUB1 689 aaPredicted RBP4.68□□□□□ -1.66
UBR1-205ENST00000564540 TAAR2Q9P1P5 351 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 HAO1Q9UJM8 370 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 PADI3Q9ULW8 664 aa4.68□□□□□ -1.66
UBR1-205ENST00000564540 A0A1W2PS18 150 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 CAPN9O14815 690 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 TGFB1I1O43294 461 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 SLC22A3O75751 556 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 ICAM3P32942 547 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 ARL1P40616 181 aaPredicted RBP4.67□□□□□ -1.66
UBR1-205ENST00000564540 FMO5P49326 533 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 EIF3BP55884 814 aaKnown RBP4.67□□□□□ -1.66
UBR1-205ENST00000564540 CXorf66Q5JRM2 361 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms