RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, human

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-222	ENST00000564228	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	TTC23L	Q6PF05	361 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	ZYG11A	Q6WRX3	759 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	GTF2IRD2	Q86UP8	949 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	XYLT1	Q86Y38	959 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	IQCF2	Q8IXL9	164 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	PEX5L	Q8IYB4	626 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	CRYBG2	Q8N1P7	616 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	ELMOD1	Q8N336	334 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	DHRSX	Q8N5I4	330 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	ANKRD52	Q8NB46	1076 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	SNX19	Q92543	992 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	DPF3	Q92784	378 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	BHMT	Q93088	406 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	CENPN	Q96H22	339 aa	Predicted RBP	11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	BTN2A3P	Q96KV6	586 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	PEBP4	Q96S96	227 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	COLEC11	Q9BWP8	271 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	HOXD1	Q9GZZ0	328 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	EIF2B3	Q9NR50	452 aa	Known RBP	11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	CACNA2D2	Q9NY47	1150 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	POU2F3	Q9UKI9	436 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	RBMX2	Q9Y388	322 aa	Known RBP	11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	NLRC5	Q86WI3	1866 aa		11.06	□□□□□ -0.64
TCF4-222	ENST00000564228	WDR27	A2RRH5	827 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PRORSD1P	A6NEY8	169 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228		H0YAE9	185 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PIGN	O95427	931 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	METTL18	O95568	372 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	KRT75	O95678	551 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	GALT	P07902	379 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	SPR	P35270	261 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	ALDH7A1	P49419	539 aa	Known RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	YWHAH	Q04917	246 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	TNK2	Q07912	1038 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	SQLE	Q14534	574 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CBX2	Q14781	532 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	KIAA0319	Q5VV43	1072 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	REP15	Q6BDI9	236 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	LCLAT1	Q6UWP7	414 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PELI3	Q8N2H9	469 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	SFRP1	Q8N474	314 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	LEMD2	Q8NC56	503 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	SLC2A14	Q8TDB8	520 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CHAC2	Q8WUX2	184 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	MCRS1	Q96EZ8	462 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	RBBP8	Q99708	897 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	HERC2P3	Q9BVR0	1158 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	SP140L	Q9H930	580 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	NMRAL1	Q9HBL8	299 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CPNE5	Q9HCH3	593 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	MARCH5	Q9NX47	278 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	IFT80	Q9P2H3	777 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CYTH4	Q9UIA0	394 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	VPS51	Q9UID3	782 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	DSE	Q9UL01	958 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PSAT1	Q9Y617	370 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	ILVBL	A1L0T0	632 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CCDC85C	A6NKD9	419 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	KCNU1	A8MYU2	1149 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PHGDH	O43175	533 aa	Known RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	DEAF1	O75398	565 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	SRP72	O76094	671 aa	Known RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	SEC24D	O94855	1032 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CHEK2	O96017	543 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CYP11A1	P05108	521 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CHRNG	P07510	517 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	IL10	P22301	178 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	FAS	P25445	335 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	DNAJB1	P25685	340 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PCSK1	P29120	753 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	ZNF143	P52747	638 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	LIMK2	P53671	638 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	TPTE	P56180	551 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	IFITM2	Q01629	132 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	MAPRE1	Q15691	268 aa	Known RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	SPANXN3	Q5MJ09	141 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	TBCEL	Q5QJ74	424 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	FAM171A1	Q5VUB5	890 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	TMEM198	Q66K66	360 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	NXN	Q6DKJ4	435 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	TMEM173	Q86WV6	379 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	LACC1	Q8IV20	430 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	TNS4	Q8IZW8	715 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PLD6	Q8N2A8	252 aa	Known RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	DCLK2	Q8N568	766 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PCDH20	Q8N6Y1	951 aa	Known RBP	11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	PQLC3	Q8N755	202 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	OR7G1	Q8NGA0	311 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CANT1	Q8WVQ1	401 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CYGB	Q8WWM9	190 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	B3GALT6	Q96L58	329 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	TMEM175	Q9BSA9	504 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	CNPY3	Q9BT09	278 aa		11.05	□□□□□ -0.64
TCF4-222	ENST00000564228	MED10	Q9BTT4	135 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms