RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ACOX1Q15067 660 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 RASA2Q15283 850 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 TMEM92Q6UXU6 159 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.79□□□□□ -0.36
CLK3-214ENST00000564096 CYP2U1Q7Z449 544 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 GALNT7Q86SF2 657 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 TDRPQ86YL5 185 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 NRSN1Q8IZ57 195 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 FLCNQ8NFG4 579 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 OR4L1Q8NH43 312 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 EPS8L3Q8TE67 593 aaKnown RBP12.79□□□□□ -0.36
CLK3-214ENST00000564096 SLC44A1Q8WWI5 657 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 FAM131CQ96AQ9 280 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 CLDN23Q96B33 292 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 ULK4Q96C45 1275 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 NUS1Q96E22 293 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 TBATAQ96M53 351 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 WRAP53Q9BUR4 548 aaKnown RBP12.79□□□□□ -0.36
CLK3-214ENST00000564096 C1QTNF7Q9BXJ2 289 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 COL25A1Q9BXS0 654 aaPredicted RBP12.79□□□□□ -0.36
CLK3-214ENST00000564096 KDM4CQ9H3R0 1056 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 BPIFA1Q9NP55 256 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 GGT7Q9UJ14 662 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 CRLS1Q9UJA2 301 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 ANKRD36A6QL64 1941 aa12.79□□□□□ -0.36
CLK3-214ENST00000564096 TCF20Q9UGU0 1960 aaKnown RBP12.79□□□□□ -0.36
CLK3-214ENST00000564096 LRRC72A6NJI9 287 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 PLK4O00444 970 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 CCL22O00626 93 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 RGS16O15492 202 aaPredicted RBP12.78□□□□□ -0.36
CLK3-214ENST00000564096 SPINT1O43278 529 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 ZNF217O75362 1048 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 SASH3O75995 380 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 KRT37O76014 449 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 SRP72O76094 671 aaKnown RBP12.78□□□□□ -0.36
CLK3-214ENST00000564096 PCDH8O95206 1070 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 PYGLP06737 847 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 C6P13671 934 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 BPIP17213 487 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 SLC1A2P43004 574 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 SLCO1A2P46721 670 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 TTPAP49638 278 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 LIG3P49916 1009 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 CCR3P51677 355 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 ARSDP51689 593 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 ADPRHP54922 357 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 SEMG2Q02383 582 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 PTSQ03393 145 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 TMED2Q15363 201 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 SMAD1Q15797 465 aaKnown RBP12.78□□□□□ -0.36
CLK3-214ENST00000564096 GPR33Q49SQ1 333 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 ZRANB3Q5FWF4 1079 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 LYPLAL1Q5VWZ2 237 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 ANO7Q6IWH7 933 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 NEK5Q6P3R8 708 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 FAM151BQ6UXP7 276 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 LIPIQ6XZB0 460 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 CERS6Q6ZMG9 384 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 ZNF765Q7L2R6 523 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 SNX20Q7Z614 316 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 PTAR1Q7Z6K3 402 aaPredicted RBP12.78□□□□□ -0.36
CLK3-214ENST00000564096 GPR150Q8NGU9 434 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 OR14C36Q8NHC7 312 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 DTX3LQ8TDB6 740 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 EDAQ92838 391 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 MTBPQ96DY7 904 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 DTD2Q96FN9 168 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 NECAB3Q96P71 396 aaPredicted RBP12.78□□□□□ -0.36
CLK3-214ENST00000564096 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 ZSCAN5AQ9BUG6 496 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 BTBD1Q9H0C5 482 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 CENPHQ9H3R5 247 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 SGK2Q9HBY8 427 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 CD320Q9NPF0 282 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 MED4Q9NPJ6 270 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 IL1RAPL1Q9NZN1 696 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 NFS1Q9Y697 457 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 CUL9Q8IWT3 2517 aa12.78□□□□□ -0.36
CLK3-214ENST00000564096 TLDC2A0PJX2 215 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 GOLGA8KD6RF30 607 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 GOLGA8TH3BQL2 631 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 CD3EAPO15446 510 aaKnown RBP12.77□□□□□ -0.37
CLK3-214ENST00000564096 TM7SF2O76062 418 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 OXTRP30559 389 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 FOXN2P32314 431 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 SPRP35270 261 aaPredicted RBP12.77□□□□□ -0.37
CLK3-214ENST00000564096 ETV3P41162 512 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 CD151P48509 253 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 RPS21P63220 83 aaKnown RBP12.77□□□□□ -0.37
CLK3-214ENST00000564096 NFATC2Q13469 925 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 PTPRCAPQ14761 206 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 PTPRRQ15256 657 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 TEDDM1Q5T9Z0 273 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 GRTP1Q5TC63 336 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 PACS1Q6VY07 963 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 HSD11B1LQ7Z5J1 315 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 STRA8Q7Z7C7 330 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 CILP2Q8IUL8 1156 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 UNC5BQ8IZJ1 945 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 CAMKK1Q8N5S9 505 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms