RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 FZD6O60353 706 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 GOLGA6DP0CG33 693 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 CYP2A6P11509 494 aaPredicted RBP16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 MPSTP25325 297 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 CD82P27701 267 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 LIMK2P53671 638 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 TYRO3Q06418 890 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 DPTQ07507 201 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 CLCA4Q14CN2 919 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 XKR5Q6UX68 686 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 TRIM74Q86UV6 250 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 ATPAF2Q8N5M1 289 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 AGAP2Q99490 1192 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 FUCA2Q9BTY2 467 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 FAM117AQ9C073 453 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 ISCUQ9H1K1 167 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 ABCG8Q9H221 673 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 PCDH18Q9HCL0 1135 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 KCTD5Q9NXV2 234 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 GOLGA6AQ9NYA3 693 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 PCDHB11Q9Y5F2 797 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 SCINQ9Y6U3 715 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 HECTD1Q9ULT8 2610 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 IGHV1OR21-1A0A087WYE8 117 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 TERTO14746 1132 aaKnown RBP16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 IL4RP24394 825 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 ARL4AP40617 200 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 MMP13P45452 471 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 GPR3P46089 330 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 GPR1P46091 355 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 PTSQ03393 145 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 CLPPQ16740 277 aaPredicted RBP16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 BOLA3Q53S33 107 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 ARMC12Q5T9G4 340 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 MARC1Q5VT66 337 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 TEX26Q8N6G2 289 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 SCAMP4Q969E2 229 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 NKD1Q969G9 470 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 BTBD6Q96KE9 485 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 TAAR9Q96RI9 348 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 SLC12A9Q9BXP2 914 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 NT5MQ9NPB1 228 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 PCDHGA3Q9Y5H0 932 aa16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 PCYT1BQ9Y5K3 369 aaPredicted RBP16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 HEMK1Q9Y5R4 338 aaPredicted RBP16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 UBR5O95071 2799 aaPredicted RBP16.73■□□□□ 0.27
HDGFL3-203ENST00000563404 STMND1H3BQB6 276 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 SUV39H1O43463 412 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 EML2O95834 649 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 THRAP10827 490 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 ACTR1BP42025 376 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 CDH6P55285 790 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 ACTR1AP61163 376 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 SLC25A11Q02978 314 aaKnown RBP16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 KLHL30Q0D2K2 578 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 SQSTM1Q13501 440 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 PYCR3Q53H96 274 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 RALGPS1Q5JS13 557 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 CCDC183Q5T5S1 534 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 TMEM164Q5U3C3 297 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 LRRC66Q68CR7 880 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 ADAMTSL4Q6UY14 1074 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 USP45Q70EL2 814 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 ZSCAN1Q8NBB4 408 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 OR4D9Q8NGE8 314 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 NAP1L5Q96NT1 182 aaPredicted RBP16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 OR2M4Q96R27 311 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 SEMA3CQ99985 751 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 MRPL47Q9HD33 250 aaKnown RBP16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 AKAP7Q9P0M2 348 aaPredicted RBP16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 IL17BQ9UHF5 180 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 B3GALT1Q9Y5Z6 326 aa16.72■□□□□ 0.27
HDGFL3-203ENST00000563404 TRBV23OR9-2A0A075B6M9 112 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 CD48P09326 243 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 MYBL1P10243 752 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 NFKBIAP25963 317 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 CSRP3P50461 194 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 MMRN1Q13201 1228 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 TRA2AQ13595 282 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 ANO6Q4KMQ2 910 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 MARK2Q7KZI7 788 aaKnown RBP16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 ZNF761Q86XN6 746 aaPredicted RBP16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 BBS5Q8N3I7 341 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 TEKT4Q8WW24 435 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 ART4Q93070 314 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 AP2M1Q96CW1 435 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 TRIM11Q96F44 468 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 COX14Q96I36 57 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 CDH19Q9H159 772 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 OCIAD1Q9NX40 245 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 KCNK4Q9NYG8 393 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 MAST4O15021 2626 aa16.71■□□□□ 0.27
HDGFL3-203ENST00000563404 SPTA1P02549 2419 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 A0A0J9YYE9 177 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 ARHGAP6O43182 974 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 TRBC1P01850 177 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 LIFP15018 202 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 UGT1A3P35503 534 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 BIRC2Q13490 618 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 HGSNATQ68CP4 663 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms