RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 NDST3O95803 873 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 TSHRP16473 764 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 CKMT2P17540 419 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 TEAD1P28347 426 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 TRIM23P36406 574 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 ETV3P41162 512 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 STC1P52823 247 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 KIAA1024LP59773 190 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 INSM1Q01101 510 aaPredicted RBP16.53■□□□□ 0.24
CDT1-202ENST00000562747 PTSQ03393 145 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 DPTQ07507 201 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 GALNT3Q14435 633 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 PCSK7Q16549 785 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 ZNF542PQ5EBM4 170 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 ITPRIPL1Q6GPH6 555 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 Q6ZVL8 140 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 NLRP8Q86W28 1048 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 PDLIM2Q96JY6 352 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 TBATAQ96M53 351 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 SMIM14Q96QK8 99 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 GBA3Q9H227 469 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 CARD9Q9H257 536 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 RSPH14Q9UHP6 348 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 OR1A2Q9Y585 309 aa16.53■□□□□ 0.24
CDT1-202ENST00000562747 C1orf232A0A0U1RR37 186 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 NEMP2A6NFY4 417 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 CACNB4O00305 520 aaPredicted RBP16.52■□□□□ 0.24
CDT1-202ENST00000562747 KCNN4O15554 427 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 PMPCBO75439 489 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 CLDN7O95471 211 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 EPOP01588 193 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 JUNDP17535 347 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 KELP23276 732 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 BLKP51451 505 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 MPP3Q13368 585 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 CDKN3Q16667 212 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 CCDC70Q6NSX1 233 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 PCSK4Q6UW60 755 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 KDELC1Q6UW63 502 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 LRRC69Q6ZNQ3 347 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 ZNF765Q7L2R6 523 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 NRSN1Q8IZ57 195 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 SLC25A45Q8N413 288 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 CCHCR1Q8TD31 782 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 FUBP1Q96AE4 644 aaKnown RBP16.52■□□□□ 0.24
CDT1-202ENST00000562747 SRPK1Q96SB4 655 aaKnown RBP16.52■□□□□ 0.24
CDT1-202ENST00000562747 FAM118BQ9BPY3 351 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 WDR26Q9H7D7 661 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 C10orf88Q9H8K7 445 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 USP29Q9HBJ7 922 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 MAGEE1Q9HCI5 957 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 UBP1Q9NZI7 540 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 KLF15Q9UIH9 416 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 CSNK1G3Q9Y6M4 447 aa16.52■□□□□ 0.24
CDT1-202ENST00000562747 ASH1LQ9NR48 2969 aaKnown RBP16.52■□□□□ 0.23
CDT1-202ENST00000562747 COL27A1Q8IZC6 1860 aaPredicted RBP16.51■□□□□ 0.23
CDT1-202ENST00000562747 A0A0U1RQS6 177 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 LOC285095A0A1B0GVY8 99 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 RGSL1A5PLK6 1076 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 PDE2AO00408 941 aaPredicted RBP16.51■□□□□ 0.23
CDT1-202ENST00000562747 SIGLEC6O43699 453 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 PYGLP06737 847 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 ACP1P24666 158 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 TNNT3P45378 269 aaPredicted RBP16.51■□□□□ 0.23
CDT1-202ENST00000562747 WNT3AP56704 352 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 PPARDQ03181 441 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 C19orf57Q0VDD7 668 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 ILKQ13418 452 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 HS1BP3Q53T59 392 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 ANKRD20A2Q5SQ80 823 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 ANKRD20A1Q5TYW2 823 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 ANKRD20A3Q5VUR7 823 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 ENPP7Q6UWV6 458 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 KDELC2Q7Z4H8 507 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 PHACTR4Q8IZ21 702 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 DCBLD1Q8N8Z6 715 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 ZNF548Q8NEK5 533 aaPredicted RBP16.51■□□□□ 0.23
CDT1-202ENST00000562747 SLC35B2Q8TB61 432 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 OXNAD1Q96HP4 312 aaPredicted RBP16.51■□□□□ 0.23
CDT1-202ENST00000562747 WDR92Q96MX6 357 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 PPP1R2P1Q96PQ5 205 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 FRMD8P1Q9BZ68 369 aaPredicted RBP16.51■□□□□ 0.23
CDT1-202ENST00000562747 UCKL1Q9NWZ5 548 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 PKD2L2Q9NZM6 624 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 SPASTQ9UBP0 616 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 APOBEC3BQ9UH17 382 aaKnown RBP16.51■□□□□ 0.23
CDT1-202ENST00000562747 CLCA2Q9UQC9 943 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 PCDHB1Q9Y5F3 818 aa16.51■□□□□ 0.23
CDT1-202ENST00000562747 TCRBV7S2A1N4TA0A589 114 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 K7ESM1 405 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 TK2O00142 265 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 TNFRSF10CO14798 259 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 SCAMP1O15126 338 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 RRP8O43159 456 aaKnown RBP16.5■□□□□ 0.23
CDT1-202ENST00000562747 AQP9O43315 295 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 ANXA9O76027 345 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 ALPPL2P10696 532 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 MYCLP1P12525 358 aaPredicted RBP16.5■□□□□ 0.23
CDT1-202ENST00000562747 HK3P52790 923 aa16.5■□□□□ 0.23
CDT1-202ENST00000562747 GEMP55040 296 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms