RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 UCMAQ8WVF2 138 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 RFFLQ8WZ73 363 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 SNAPC3Q92966 411 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 GTF3C6Q969F1 213 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 PABPC5Q96DU9 382 aaKnown RBP3.09□□□□□ -1.91
DENND4A-205ENST00000562540 C7orf26Q96N11 449 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 ZNF570Q96NI8 536 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 PIP5K1AQ99755 562 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 RANBP17Q9H2T7 1088 aaKnown RBP3.09□□□□□ -1.91
DENND4A-205ENST00000562540 ZHX3Q9H4I2 956 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 PRKRIP1Q9H875 184 aaPredicted RBP3.09□□□□□ -1.91
DENND4A-205ENST00000562540 BRF2Q9HAW0 419 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 PCDHB16Q9NRJ7 776 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 SLC6A13Q9NSD5 602 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 SMARCAL1Q9NZC9 954 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 MKLN1Q9UL63 735 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 TAF1P21675 1872 aa3.09□□□□□ -1.92
DENND4A-205ENST00000562540 TP53BP1Q12888 1972 aaPredicted RBP3.09□□□□□ -1.92
DENND4A-205ENST00000562540 A0A1W2PQM1 296 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 NPIPB15A6NHN6 443 aaPredicted RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 B4E171 279 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 TAF4O00268 1085 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 WNT9BO14905 357 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 SEC14L5O43304 696 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 SH3BP5O60239 455 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 TMEM63AO94886 807 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 KDM4BO94953 1096 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 SEC31AO94979 1220 aaKnown RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 CCNDBP1O95273 360 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 VNN2O95498 520 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 CLEC3BP05452 202 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 MMP2P08253 660 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 SPARCP09486 303 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 HSPA1AP0DMV8 641 aaKnown RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 HSPA1BP0DMV9 641 aaKnown RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 ITGAXP20702 1163 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 AGAP20933 346 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 HOXC13P31276 330 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 CDAP32320 146 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 MAN1A1P33908 653 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 BSGP35613 385 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 TSPAN7P41732 249 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 OLR1P78380 273 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 DCTN2Q13561 401 aaKnown RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 SLC1A5Q15758 541 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 MMEL1Q495T6 779 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 PPP6R3Q5H9R7 873 aaPredicted RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 FAM69BQ5VUD6 431 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 QSOX2Q6ZRP7 698 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 LINGO2Q7L985 606 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 CPLX4Q7Z7G2 160 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 SFR1Q86XK3 245 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 KRTAP7-1Q8IUC3 87 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 DSELQ8IZU8 1212 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 ZBTB2Q8N680 514 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 AGBL3Q8NEM8 1001 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 TDRD7Q8NHU6 1098 aaKnown RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 HUS1BQ8NHY5 278 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 FAM149B1Q96BN6 582 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 LRFN5Q96NI6 719 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 RBM4Q9BWF3 364 aaKnown RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 GLIS2Q9BZE0 524 aaPredicted RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 USP44Q9H0E7 712 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 DDX4Q9NQI0 724 aaKnown RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 OLA1Q9NTK5 396 aaKnown RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 ZNF224Q9NZL3 707 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 LIMA1Q9UHB6 759 aaKnown RBP3.08□□□□□ -1.92
DENND4A-205ENST00000562540 CDC14AQ9UNH5 594 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 ERVK-11Q9UQG0 969 aa3.08□□□□□ -1.92
DENND4A-205ENST00000562540 hDV102S1A0JD36 115 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 TMEM202A6NGA9 273 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 C16orf97H3BN30 126 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 J3KR12 359 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 IFNL4K9M1U5 179 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 HSPA12AO43301 675 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 ZIC3O60481 467 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 WDHD1O75717 1129 aaPredicted RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 GAGE7O76087 117 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 GAGE12FP0CL80 117 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 GAGE12GP0CL81 117 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 GAGE12IP0CL82 117 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 FGF5P12034 268 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 CHMP24386 653 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 SHMT1P34896 483 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 SORDQ00796 357 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 GAGE1Q13065 139 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 GAGE4Q13068 117 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 TNFAIP1Q13829 316 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 FGFBP1Q14512 234 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 ALG11Q2TAA5 492 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 COL28A1Q2UY09 1125 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 DPCR1Q3MIW9 517 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 FBXO46Q6PJ61 603 aaPredicted RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 TSSK4Q6SA08 328 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 ZC3HC1Q86WB0 502 aaKnown RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 CIARTQ8N365 385 aaPredicted RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 OR13A1Q8NGR1 328 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 GRAPLQ8TC17 118 aaPredicted RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 KCNG4Q8TDN1 519 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 TAS1R2Q8TE23 839 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms