RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 RPA3P35244 121 aaPredicted RBP7.53□□□□□ -1.2
TPM1-231ENST00000561395 SLC1A2P43004 574 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 MAGEA12P43365 314 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 SERPINB8P50452 374 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ZNF140P52738 457 aaPredicted RBP7.53□□□□□ -1.2
TPM1-231ENST00000561395 ECT2LQ008S8 904 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 LRRC32Q14392 662 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 GRM2Q14416 872 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 LRRC14Q15048 493 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 CNGA3Q16281 694 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 QPCTQ16769 361 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 DGKKQ5KSL6 1271 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 PLA2G2CQ5R387 149 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 TRIM68Q6AZZ1 485 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 TANGO2Q6ICL3 276 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 KIAA0408Q6ZU52 694 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ADIPOR2Q86V24 386 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 YAF2Q8IY57 180 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 AHI1Q8N157 1196 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 SPEM1Q8N4L4 309 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 C2CD4AQ8NCU7 369 aaPredicted RBP7.53□□□□□ -1.2
TPM1-231ENST00000561395 LPCAT1Q8NF37 534 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 BPIFB1Q8TDL5 484 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ACMSDQ8TDX5 336 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 DYDC1Q8WWB3 177 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ATP2A3Q93084 1043 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ELSPBP1Q96BH3 223 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 MYO19Q96H55 970 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 LOXL4Q96JB6 756 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 DNAJC1Q96KC8 554 aaKnown RBP7.53□□□□□ -1.2
TPM1-231ENST00000561395 RPL10LQ96L21 214 aaKnown RBP7.53□□□□□ -1.2
TPM1-231ENST00000561395 EDEM2Q9BV94 578 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ADGRE3Q9BY15 652 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 TM6SF2Q9BZW4 377 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ATP13A3Q9H7F0 1226 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 BRD9Q9H8M2 597 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 MLXIPLQ9NP71 852 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 PCMTD2Q9NV79 361 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 SLC25A13Q9UJS0 675 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 FBXO10Q9UK96 956 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 SPO11Q9Y5K1 396 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ARL5AQ9Y689 179 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 PIAS3Q9Y6X2 628 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ACACAQ13085 2346 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 CACNA1EQ15878 2313 aa7.52□□□□□ -1.2
TPM1-231ENST00000561395 ANKRD66B4E2M5 251 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 TRAFD1O14545 582 aaPredicted RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 COPEO14579 308 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 TPP1O14773 563 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 TRIM24O15164 1050 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 SLC7A4O43246 635 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 HTRA2O43464 458 aaPredicted RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 TIMM44O43615 452 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 RPP40O75818 363 aaKnown RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 PGLSO95336 258 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 PIGNO95427 931 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 CRTAMO95727 393 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 F7P08709 466 aaPredicted RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 CISD3P0C7P0 127 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 ARSAP15289 507 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 POLR2EP19388 210 aaKnown RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 PSMA3P25788 255 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 MPLP40238 635 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 GRIA4P48058 902 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 ARSDP51689 593 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 WDR4P57081 412 aaKnown RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 RPL26P61254 145 aaKnown RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 SNRPD1P62314 119 aaKnown RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 MPP1Q00013 466 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 IL9RQ01113 521 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 BCL2L1Q07817 233 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 THOC5Q13769 683 aaKnown RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 PDGFRLQ15198 375 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 TAF1AQ15573 450 aaPredicted RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 UGP2Q16851 508 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 GEN1Q17RS7 908 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 GAB4Q2WGN9 574 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 ARMC12Q5T9G4 340 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 TMEM215Q68D42 235 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 MBLAC2Q68D91 279 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 ZNF470Q6ECI4 717 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 TCEAL6Q6IPX3 200 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 FSTL4Q6MZW2 842 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 NEPROQ6NW34 567 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 GLT6D1Q7Z4J2 308 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 GALNT7Q86SF2 657 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 WDR5BQ86VZ2 330 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 ZC3HC1Q86WB0 502 aaKnown RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 DENND6AQ8IWF6 608 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 ETFBKMTQ8IXQ9 262 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 TTC30BQ8N4P2 665 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 PCDH20Q8N6Y1 951 aaKnown RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 NAT16Q8N8M0 369 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 OR2AP1Q8NGE2 309 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 OR6K2Q8NGY2 324 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 GABPB2Q8TAK5 448 aaPredicted RBP7.52□□□□□ -1.21
TPM1-231ENST00000561395 GDAP1Q8TB36 358 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 CALML6Q8TD86 181 aa7.52□□□□□ -1.21
TPM1-231ENST00000561395 TCP10LQ8TDR4 215 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms