RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 APOC4-APOC2K7ER74 178 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 MT-CO3P00414 261 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 APOC2P02655 101 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 PTPN7P35236 360 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 ATP5OP48047 213 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 GALNT3Q14435 633 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 PCSK7Q16549 785 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 GUSBP11Q6P575 273 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 PEX26Q7Z412 305 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 TAF8Q7Z7C8 310 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 SPATA22Q8NHS9 363 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 MAPK15Q8TD08 544 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 HTR3CQ8WXA8 447 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 NAT6Q93015 286 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 SCAMP4Q969E2 229 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 RIOK2Q9BVS4 552 aaKnown RBP17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 FRMD8Q9BZ67 464 aaPredicted RBP17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 PKD2L2Q9NZM6 624 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 KLHL8Q9P2G9 620 aaPredicted RBP17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 TRIM10Q9UDY6 481 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 PADI4Q9UM07 663 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 CLCA2Q9UQC9 943 aa17.25■□□□□ 0.35
AC105339.3-201ENST00000560043 RGSL1A5PLK6 1076 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 PMPCBO75439 489 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 NDST3O95803 873 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 MT-CYBP00156 380 aaPredicted RBP17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 CAPNS1P04632 268 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 CEACAM5P06731 702 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 NFKB1P19838 968 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 CD68P34810 354 aaPredicted RBP17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 SPINT3P49223 89 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 NOMO1Q15155 1222 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 PID1Q7Z2X4 250 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 UBL4BQ8N7F7 174 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 ARL10Q8N8L6 244 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 DCBLD1Q8N8Z6 715 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 ALG3Q92685 438 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 SRPK1Q96SB4 655 aaKnown RBP17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 FERMT1Q9BQL6 677 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 TMEM168Q9H0V1 697 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 FAM83DQ9H4H8 585 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 CARS2Q9HA77 564 aaKnown RBP17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 ZFYVE1Q9HBF4 777 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 MAGEE1Q9HCI5 957 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 SIRPGQ9P1W8 387 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 FAM153AQ9UHL3 310 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 TRHDEQ9UKU6 1024 aa17.24■□□□□ 0.35
AC105339.3-201ENST00000560043 MIF4GDA9UHW6 222 aaKnown RBP17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 TJP3O95049 919 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 SOD1P00441 154 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 TNNT3P45378 269 aaPredicted RBP17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 OTUD4Q01804 1114 aaKnown RBP17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 CDCP2Q5VXM1 449 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 LYSMD3Q7Z3D4 306 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 ZNF567Q8N184 647 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 KYQ8NBH2 561 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 FAM46DQ8NEK8 389 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 ACTL9Q8TC94 416 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 HIC2Q96JB3 615 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 FCRL5Q96RD9 977 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 AGAP2Q99490 1192 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 HERPUD2Q9BSE4 406 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 SUDS3Q9H7L9 328 aaPredicted RBP17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 TRNAU1APQ9NX07 287 aaKnown RBP17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 UBP1Q9NZI7 540 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 SUFUQ9UMX1 484 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 SLC17A4Q9Y2C5 497 aa17.23■□□□□ 0.35
AC105339.3-201ENST00000560043 LRP4O75096 1905 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 A0A0U1RQJ8 604 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 IVLP07476 585 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 PIRTP0C851 137 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 PYGMP11217 842 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 RBL1P28749 1068 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 GNPDA1P46926 289 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 POLD2P49005 469 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 WNT3AP56704 352 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 CYP4F3Q08477 520 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 OGFOD3Q6PK18 319 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 DOK6Q6PKX4 331 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 KDELC1Q6UW63 502 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 CDKL3Q8IVW4 592 aaPredicted RBP17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 RNF10Q8N5U6 811 aaKnown RBP17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 OR6C4Q8NGE1 309 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 MDM1Q8TC05 714 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 DEPDC7Q96QD5 511 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 WDR24Q96S15 920 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 GSDMCQ9BYG8 508 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 GPR63Q9BZJ6 419 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 RAD18Q9NS91 495 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 DKK4Q9UBT3 224 aa17.22■□□□□ 0.35
AC105339.3-201ENST00000560043 CACNA1BQ00975 2339 aa17.21■□□□□ 0.35
AC105339.3-201ENST00000560043 USP24Q9UPU5 2620 aa17.21■□□□□ 0.35
AC105339.3-201ENST00000560043 FRYQ5TBA9 3013 aa17.21■□□□□ 0.35
AC105339.3-201ENST00000560043 INPP4BO15327 924 aa17.21■□□□□ 0.35
AC105339.3-201ENST00000560043 FTCDO95954 541 aa17.21■□□□□ 0.35
AC105339.3-201ENST00000560043 EPOP01588 193 aa17.21■□□□□ 0.35
AC105339.3-201ENST00000560043 FUCA1P04066 466 aa17.21■□□□□ 0.35
AC105339.3-201ENST00000560043 PTMAP06454 111 aaKnown RBP17.21■□□□□ 0.35
AC105339.3-201ENST00000560043 EIF3EP60228 445 aaKnown RBP17.21■□□□□ 0.35
AC105339.3-201ENST00000560043 ILF3Q12906 894 aaKnown RBP eCLIP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms