RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 BTBD9Q96Q07 612 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 CDRT15Q96T59 188 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SPON2Q9BUD6 331 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 NUSAP1Q9BXS6 441 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 KLHL4Q9C0H6 718 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 CYP4F12Q9HCS2 524 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 PFDN4Q9NQP4 134 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 POLR3BQ9NW08 1133 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 HCSTQ9UBK5 93 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SUCOQ9UBS9 1254 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SCOCQ9UIL1 159 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 YIPF1Q9Y548 306 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SPO11Q9Y5K1 396 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 MRPL42Q9Y6G3 142 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 OAS3Q9Y6K5 1087 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 MTCL1Q9Y4B5 1905 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PRSS51A0A1B0GVH4 220 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 TYW5A2RUC4 315 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 GOLGA8CPA6NN73 597 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 GFRA2O00451 464 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 AZIN1O14977 448 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 KIF1CO43896 1103 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 KLK8O60259 260 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 VPS26AO75436 327 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 SKAP2O75563 359 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 SRP72O76094 671 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 RHOBTB1O94844 696 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 SEC24AO95486 1093 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PRLP01236 227 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 SLC4A1P02730 911 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 KLKB1P03952 638 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 SNRPB2P08579 225 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 RPS17P08708 135 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 ENO3P13929 434 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 MTHFD2P13995 350 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PKMP14618 531 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 RAG1P15918 1043 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 RFC2P35250 354 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 RGRP47804 291 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 SCNN1BP51168 640 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 STX1BP61266 288 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 AP1S1P61966 158 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 GRIK2Q13002 908 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 CEACAM7Q14002 265 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 RAB33AQ14088 237 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 FLOT2Q14254 428 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 TAF12Q16514 161 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 UGT3A2Q3SY77 523 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 AGKQ53H12 422 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 TCHHL1Q5QJ38 904 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PPM1LQ5SGD2 360 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 OGFRL1Q5TC84 451 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 RNF219Q5W0B1 726 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 KANK2Q63ZY3 851 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 KIAA1841Q6NSI8 718 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 UGT3A1Q6NUS8 523 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PRMT9Q6P2P2 845 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 CNKSR3Q6P9H4 555 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 NCEH1Q6PIU2 408 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 GK5Q6ZS86 529 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 ANKRD33Q7Z3H0 272 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 METTL3Q86U44 580 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 LDB1Q86U70 411 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PIM3Q86V86 326 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 FAM217AQ8IXS0 508 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 TCEAL8Q8IYN2 117 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PQLC1Q8N2U9 271 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 FBXO39Q8N4B4 442 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PTGR2Q8N8N7 351 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 MDGA1Q8NFP4 955 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 OR4K2Q8NGD2 314 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 OR52K2Q8NGK3 314 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 MICAL1Q8TDZ2 1067 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PYDC1Q8WXC3 89 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.06□□□□□ -1.123e-6■■■■■ 32.7
SMAD3-212ENST00000559937 ARMC5Q96C12 935 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 CCDC124Q96CT7 223 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PHF21BQ96EK2 531 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 MOCOSQ96EN8 888 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 DUS3LQ96G46 650 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 ZNF558Q96NG5 402 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 TOX2Q96NM4 488 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 CLSTN3Q9BQT9 956 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 VN1R3Q9BXE9 311 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 UNKQ9C0B0 810 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 UNC93B1Q9H1C4 597 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 HIPK3Q9H422 1215 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 SUDS3Q9H7L9 328 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 ACSS2Q9NR19 701 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 TMEM45AQ9NWC5 275 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PDP2Q9P2J9 529 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 EPS15L1Q9UBC2 864 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 DNMT3BQ9UBC3 853 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 LHX3Q9UBR4 397 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 RNF112Q9ULX5 631 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 G3BP2Q9UN86 482 aaKnown RBP8.06□□□□□ -1.12
SMAD3-212ENST00000559937 CRYL1Q9Y2S2 319 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 RAI2Q9Y5P3 530 aa8.06□□□□□ -1.12
SMAD3-212ENST00000559937 PLXNB3Q9ULL4 1909 aa8.05□□□□□ -1.12
SMAD3-212ENST00000559937 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms