RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 AKAP7Q9P0M2 348 aaPredicted RBP14.89□□□□□ -0.03
LRRC28-213ENST00000559399 CD84Q9UIB8 345 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 DNPEPQ9ULA0 475 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 TTLL3Q9Y4R7 772 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 TDRD6O60522 2096 aaKnown RBP14.88□□□□□ -0.03
LRRC28-213ENST00000559399 PRAMEF33A0A0G2JMD5 474 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 A0A0J9YYE9 177 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 A0A0U1RQS6 177 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 AGRPO00253 132 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 MATN3O15232 486 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 B4GAT1O43505 415 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 PRAMEF10O60809 474 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 MAP3K6O95382 1288 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 SOD1P00441 154 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 TRBC1P01850 177 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 GYPCP04921 128 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 PYGLP06737 847 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 LIPCP11150 499 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 ZNF30P17039 623 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 CA4P22748 312 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 CES1P23141 567 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 ALDH4A1P30038 563 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 ADCY8P40145 1251 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 OR1D5P58170 312 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 CTBSQ01459 385 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 DSC2Q02487 901 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 PDK2Q15119 407 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 TGIF1Q15583 401 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 ANKRD20A8PQ5CZ79 823 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 RFLNAQ6ZTI6 216 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 ZNF765Q7L2R6 523 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 TMPRSS9Q7Z410 1059 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 PIM3Q86V86 326 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.88□□□□□ -0.03
LRRC28-213ENST00000559399 FATE1Q969F0 183 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 OR2M4Q96R27 311 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 TDRD1Q9BXT4 1180 aaKnown RBP14.88□□□□□ -0.03
LRRC28-213ENST00000559399 ABCG8Q9H221 673 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 SEMA6CQ9H3T2 930 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 RBM22Q9NW64 420 aaKnown RBP eCLIP14.88□□□□□ -0.03
LRRC28-213ENST00000559399 CTTNBP2NLQ9P2B4 639 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 AMACRQ9UHK6 382 aa14.88□□□□□ -0.03
LRRC28-213ENST00000559399 PROSCO94903 275 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 KRT7P08729 469 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 CCNCP24863 283 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 ETV5P41161 510 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 ACTR1BP42025 376 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 GPR3P46089 330 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 STC1P52823 247 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 ACTR1AP61163 376 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 PTSQ03393 145 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 LY6DQ14210 128 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 C16orf72Q14CZ0 275 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 IFI16Q16666 785 aaKnown RBP14.87□□□□□ -0.03
LRRC28-213ENST00000559399 TRIM74Q86UV6 250 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 NLRP8Q86W28 1048 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 MAP7D3Q8IWC1 876 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 NAGSQ8N159 534 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 PATE1Q8WXA2 126 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 USP7Q93009 1102 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 SCAMP4Q969E2 229 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 SCARF2Q96GP6 870 aaPredicted RBP14.87□□□□□ -0.03
LRRC28-213ENST00000559399 TSGA13Q96PP4 275 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 SMIM14Q96QK8 99 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 NUDT22Q9BRQ3 303 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 SEMA4CQ9C0C4 833 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 SEPT10Q9P0V9 454 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 UVRAGQ9P2Y5 699 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 LCMT1Q9UIC8 334 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 NENFQ9UMX5 172 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 TMEM98Q9Y2Y6 226 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 ST14Q9Y5Y6 855 aa14.87□□□□□ -0.03
LRRC28-213ENST00000559399 MGAQ8IWI9 3026 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 EFSO43281 561 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 MX2P20592 715 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 CD82P27701 267 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 MAPK10P53779 464 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 TAS2R40P59535 323 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 RPL26P61254 145 aaKnown RBP14.86□□□□□ -0.03
LRRC28-213ENST00000559399 GBE1Q04446 702 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 LRP8Q14114 963 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 ATP13A4Q4VNC1 1196 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 USP53Q70EK8 1073 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 MARK2Q7KZI7 788 aaKnown RBP14.86□□□□□ -0.03
LRRC28-213ENST00000559399 CPNE8Q86YQ8 564 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 GALNT13Q8IUC8 556 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 NRSN1Q8IZ57 195 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 LPCAT1Q8NF37 534 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 CTNNBL1Q8WYA6 563 aaPredicted RBP14.86□□□□□ -0.03
LRRC28-213ENST00000559399 FAF2Q96CS3 445 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 MED8Q96G25 268 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 FOXJ2Q9P0K8 574 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 IFNKQ9P0W0 207 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 RPL26L1Q9UNX3 145 aaKnown RBP14.86□□□□□ -0.03
LRRC28-213ENST00000559399 CHKBQ9Y259 395 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 PCDHB11Q9Y5F2 797 aa14.86□□□□□ -0.03
LRRC28-213ENST00000559399 IGHV5-10-1A0A0J9YXX1 117 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 C9orf172C9J069 976 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 HGSO14964 777 aaPredicted RBP14.85□□□□□ -0.03
LRRC28-213ENST00000559399 HLA-DQB2P05538 268 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms