RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 KANSL1Q7Z3B3 1105 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 HSD11B1LQ7Z5J1 315 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TECPR1Q7Z6L1 1165 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TAF8Q7Z7C8 310 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TSPAN33Q86UF1 283 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 RBFAQ8N0V3 343 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CBARPQ8N350 705 aaPredicted RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 CNTD1Q8N815 330 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 ARL10Q8N8L6 244 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PLA2G15Q8NCC3 412 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TRIM58Q8NG06 486 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 SPATA22Q8NHS9 363 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 WDR48Q8TAF3 677 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 ACTL9Q8TC94 416 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 MAPK15Q8TD08 544 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 ALG3Q92685 438 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 SCAMP4Q969E2 229 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TSACCQ96A04 125 aaPredicted RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 FUBP1Q96AE4 644 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 HES6Q96HZ4 224 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 HIC2Q96JB3 615 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 APOLD1Q96LR9 279 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TTC25Q96NG3 672 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CNTNAP3BQ96NU0 1288 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 QKIQ96PU8 341 aaKnown RBP eCLIP4.36□□□□□ -1.71
SNX1-205ENST00000559339 FCRL5Q96RD9 977 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 ZSCAN5AQ9BUG6 496 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 LRRC61Q9BV99 259 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 LGR4Q9BXB1 951 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 SPATA16Q9BXB7 569 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TEX101Q9BY14 249 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 GSDMCQ9BYG8 508 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CEP41Q9BYV8 373 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CNTNAP3Q9BZ76 1288 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 DPEP2Q9H4A9 486 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 FAM83DQ9H4H8 585 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CARS2Q9HA77 564 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 GRPEL1Q9HAV7 217 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 GLOD4Q9HC38 313 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CYP4F12Q9HCS2 524 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 LZTFL1Q9NQ48 299 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TRNAU1APQ9NX07 287 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 TOR4AQ9NXH8 423 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 UBP1Q9NZI7 540 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 HACD3Q9P035 362 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 GULP1Q9UBP9 304 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 RSPH14Q9UHP6 348 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CD84Q9UIB8 345 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 KLF15Q9UIH9 416 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 KLK13Q9UKR3 277 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PADI4Q9UM07 663 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PACSIN2Q9UNF0 486 aaPredicted RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 CLCA2Q9UQC9 943 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PKP3Q9Y446 797 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 ADGRG1Q9Y653 693 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TNRC6BQ9UPQ9 1833 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 ACACBO00763 2458 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CEP192Q8TEP8 1941 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CHD5Q8TDI0 1954 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 EME2A4GXA9 379 aaPredicted RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 C5orf60A6NFR6 353 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 TMEM202A6NGA9 273 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 C2orf81A6NN90 581 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 C1QTNF9BB2RNN3 333 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GPR89AB7ZAQ6 455 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 INPP4BO15327 924 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 NUDT21O43809 227 aaKnown RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 TCEA3O75764 348 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 SLC25A14O95258 325 aaPredicted RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 ASMTLO95671 621 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 CRTAMO95727 393 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 TOP3BO95985 862 aaKnown RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 GAS8O95995 478 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 SLC4A1P02730 911 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 FGF1P05230 155 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 CEACAM5P06731 702 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 PROS1P07225 676 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 C1QTNF9P0C862 333 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GPR89BP0CG08 455 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GIMD1P0DJR0 217 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 SLC2A4P14672 509 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 PNLIPP16233 465 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GLB1P16278 677 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 NFKB1P19838 968 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 RBL1P28749 1068 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GNPDA1P46926 289 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 SPINT3P49223 89 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GEMP55040 296 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 WNT3AP56704 352 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 DCDC1P59894 354 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ADCY2Q08462 1091 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 WASHC5Q12768 1159 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 TARDBPQ13148 414 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNX1-205ENST00000559339 SPIDRQ14159 915 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 RPS6KA1Q15418 735 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 TCEA2Q15560 299 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 SLC1A5Q15758 541 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ST3GAL2Q16842 350 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ANKRD20A2Q5SQ80 823 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 TPRG1LQ5T0D9 272 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms