RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PTAR1Q7Z6K3 402 aaPredicted RBP18.02■□□□□ 0.48
CLPX-203ENST00000558958 FAM124AQ86V42 546 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 CNTN4Q8IWV2 1026 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 CAMKK1Q8N5S9 505 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 CDKL2Q92772 493 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 CDH19Q9H159 772 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 PREBQ9HCU5 417 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 RAD18Q9NS91 495 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 IARS2Q9NSE4 1012 aaKnown RBP18.02■□□□□ 0.48
CLPX-203ENST00000558958 ZFATQ9P243 1243 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 VPS18Q9P253 973 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 NFKBIL1Q9UBC1 381 aaPredicted RBP18.02■□□□□ 0.48
CLPX-203ENST00000558958 FETUBQ9UGM5 382 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 APPL1Q9UKG1 709 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 GLYATL1P3A0A0U1RQE8 302 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 GOLGA8CPA6NN73 597 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 SASH3O75995 380 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 MC4RP32245 332 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 CCR3P51677 355 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 IFFO1Q0D2I5 559 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 NAB1Q13506 487 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 LRRC6Q86X45 466 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 CTAGE3PQ8IX95 158 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 LMNTD2Q8IXW0 634 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 NRSN1Q8IZ57 195 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 PPM1NQ8N819 430 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 GPR150Q8NGU9 434 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 CALML6Q8TD86 181 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 DTD2Q96FN9 168 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 AGAP2Q99490 1192 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 FAM167BQ9BTA0 163 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 TMEM109Q9BVC6 243 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 FAM83DQ9H4H8 585 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 FNDC3AQ9Y2H6 1198 aaKnown RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 COQ6Q9Y2Z9 468 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 IGLON5A6NGN9 336 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 CD3EAPO15446 510 aaKnown RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 LZTS3O60299 673 aaPredicted RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 SRP72O76094 671 aaKnown RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 RECQL5O94762 991 aaPredicted RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 PRAMEF1O95521 474 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 GCAP28676 217 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 FOXN2P32314 431 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 ACSL1P33121 698 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 ZNF844Q08AG5 666 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 KIAA1161Q6NSJ0 714 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 NEK5Q6P3R8 708 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 FAM151BQ6UXP7 276 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 MARK2Q7KZI7 788 aaKnown RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 DTX3LQ8TDB6 740 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 ROPN1BQ9BZX4 212 aaPredicted RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 BTBD1Q9H0C5 482 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 PPCSQ9HAB8 311 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 ROPN1Q9HAT0 212 aaPredicted RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 SGK2Q9HBY8 427 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 CATSPERZQ9NTU4 200 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 MARCH4Q9P2E8 410 aaPredicted RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 SLC17A6Q9P2U8 582 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 CD84Q9UIB8 345 aa18.01■□□□□ 0.47
CLPX-203ENST00000558958 ZFR2Q9UPR6 939 aaKnown RBP18.01■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3DA0A087WVF3 549 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3IA0A087WXS9 549 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3EA0A087X179 549 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3KA0A087X1G2 549 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3FA6NER0 549 aaPredicted RBP18■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3LB9A6J9 549 aa18■□□□□ 0.47
CLPX-203ENST00000558958 POC1B-GALNT4F8VUJ3 575 aa18■□□□□ 0.47
CLPX-203ENST00000558958 K7ESF4 209 aa18■□□□□ 0.47
CLPX-203ENST00000558958 ATP8B1O43520 1251 aa18■□□□□ 0.47
CLPX-203ENST00000558958 ZNF217O75362 1048 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TM7SF2O76062 418 aa18■□□□□ 0.47
CLPX-203ENST00000558958 IVLP07476 585 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3HP0C7X1 549 aa18■□□□□ 0.47
CLPX-203ENST00000558958 RPS21P63220 83 aaKnown RBP18■□□□□ 0.47
CLPX-203ENST00000558958 CACNG1Q06432 222 aa18■□□□□ 0.47
CLPX-203ENST00000558958 CHRNA6Q15825 494 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TMEM259Q4ZIN3 620 aa18■□□□□ 0.47
CLPX-203ENST00000558958 FASTKD1Q53R41 847 aaKnown RBP18■□□□□ 0.47
CLPX-203ENST00000558958 TMEM31Q5JXX7 168 aa18■□□□□ 0.47
CLPX-203ENST00000558958 HENMT1Q5T8I9 393 aaKnown RBP18■□□□□ 0.47
CLPX-203ENST00000558958 SEL1L3Q68CR1 1132 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3GQ6DHY5 549 aa18■□□□□ 0.47
CLPX-203ENST00000558958 ZNF470Q6ECI4 717 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3CQ6IPX1 549 aa18■□□□□ 0.47
CLPX-203ENST00000558958 MRNIPQ6NTE8 343 aa18■□□□□ 0.47
CLPX-203ENST00000558958 ZNF765Q7L2R6 523 aa18■□□□□ 0.47
CLPX-203ENST00000558958 CILP2Q8IUL8 1156 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TBC1D3Q8IZP1 549 aaPredicted RBP18■□□□□ 0.47
CLPX-203ENST00000558958 GABPB2Q8TAK5 448 aaPredicted RBP18■□□□□ 0.47
CLPX-203ENST00000558958 SLC44A1Q8WWI5 657 aa18■□□□□ 0.47
CLPX-203ENST00000558958 SCAMP4Q969E2 229 aa18■□□□□ 0.47
CLPX-203ENST00000558958 PAFAH2Q99487 392 aa18■□□□□ 0.47
CLPX-203ENST00000558958 DHRS4Q9BTZ2 278 aa18■□□□□ 0.47
CLPX-203ENST00000558958 TPSD1Q9BZJ3 242 aa18■□□□□ 0.47
CLPX-203ENST00000558958 ABCG8Q9H221 673 aa18■□□□□ 0.47
CLPX-203ENST00000558958 SLC24A2Q9UI40 661 aa18■□□□□ 0.47
CLPX-203ENST00000558958 CYP8B1Q9UNU6 501 aa18■□□□□ 0.47
CLPX-203ENST00000558958 PSAT1Q9Y617 370 aa18■□□□□ 0.47
CLPX-203ENST00000558958 SLC30A1Q9Y6M5 507 aa18■□□□□ 0.47
CLPX-203ENST00000558958 ZNF106Q9H2Y7 1883 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms