RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 C9JVG2 144 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 SUPT3HO75486 399 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 GFAPP14136 432 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 FOXA1P55317 472 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 CCNIQ14094 377 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 TSNQ15631 228 aaKnown RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 SETMARQ53H47 684 aaPredicted RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 UNC50Q53HI1 259 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 ZNF678Q5SXM1 525 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 ACBD5Q5T8D3 534 aaPredicted RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 METTL21CQ5VZV1 264 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 TPGS2Q68CL5 300 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 GAREM2Q75VX8 874 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 TAS2R42Q7RTR8 314 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 DCBLD1Q8N8Z6 715 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 FAM156AQ8NDB6 213 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 ACTRT2Q8TDY3 377 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 DNAJC9Q8WXX5 260 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 LPGAT1Q92604 370 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 RPL10LQ96L21 214 aaKnown RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 C3orf30Q96M34 536 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 CCDC68Q9H2F9 335 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 UTP6Q9NYH9 597 aaKnown RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 SPG21Q9NZD8 308 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 VTI1BQ9UEU0 232 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 POMPQ9Y244 141 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 KIAA0100Q14667 2235 aaKnown RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 ITGB6P18564 788 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 VHLP40337 213 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 DPP6P42658 865 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 RAB33AQ14088 237 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 TAF1AQ15573 450 aaPredicted RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 CHST9Q7L1S5 443 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 MYLK4Q86YV6 388 aaPredicted RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 HERC6Q8IVU3 1022 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 MFN1Q8IWA4 741 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 BBS7Q8IWZ6 715 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 DSELQ8IZU8 1212 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 OR9I1Q8NGQ6 314 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 TRPC4APQ8TEL6 797 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 ZNF689Q96CS4 500 aaPredicted RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 EID2BQ96D98 161 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 IL21Q9HBE4 155 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 MRPL17Q9NRX2 175 aaKnown RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 CCDC167Q9P0B6 97 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 CFAP97Q9P2B7 532 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 EVLQ9UI08 416 aaPredicted RBP10.53□□□□□ -0.72
TPM1-210ENST00000558264 TRAF6Q9Y4K3 522 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 ANKRD12Q6UB98 2062 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 ANAPC1Q9H1A4 1944 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 MYO7AQ13402 2215 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 C5orf42Q9H799 3197 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 ANKRD36A6QL64 1941 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 DOCK6Q96HP0 2047 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 A0A1W2PRU2 124 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 RGSL1A5PLK6 1076 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 STX7O15400 261 aaKnown RBP10.52□□□□□ -0.72
TPM1-210ENST00000558264 GREM1O60565 184 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 SMIM24O75264 130 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 LUC7L3O95232 432 aaKnown RBP10.52□□□□□ -0.72
TPM1-210ENST00000558264 CNPP09543 421 aaKnown RBP10.52□□□□□ -0.72
TPM1-210ENST00000558264 THRAP10827 490 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 MTHFD2P13995 350 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 IMPDH1P20839 514 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 LPOP22079 712 aaPredicted RBP10.52□□□□□ -0.72
TPM1-210ENST00000558264 DNAJB1P25685 340 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 CA5AP35218 305 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 CCNG1P51959 295 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 WDR5P61964 334 aaKnown RBP10.52□□□□□ -0.72
TPM1-210ENST00000558264 SH3BP2P78314 561 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 ECT2LQ008S8 904 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 LRRC26Q2I0M4 334 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 TYSND1Q2T9J0 566 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 AFTPHQ6ULP2 937 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 LYSMD3Q7Z3D4 306 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 PCDH20Q8N6Y1 951 aaKnown RBP10.52□□□□□ -0.72
TPM1-210ENST00000558264 GPR150Q8NGU9 434 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 TRMT2BQ96GJ1 504 aaKnown RBP10.52□□□□□ -0.72
TPM1-210ENST00000558264 ZNF333Q96JL9 665 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 CDRT15Q96T59 188 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 RTKNQ9BST9 563 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 ZNF385DQ9H6B1 395 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 ZBTB26Q9HCK0 441 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 MID1IP1Q9NPA3 183 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 SEMA4BQ9NPR2 832 aaPredicted RBP10.52□□□□□ -0.72
TPM1-210ENST00000558264 BTRCQ9Y297 605 aa10.52□□□□□ -0.72
TPM1-210ENST00000558264 CHD7Q9P2D1 2997 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 TRIM43BA6NCK2 446 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 ZBBXA8MT70 800 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 SLCO1B7G3V0H7 640 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 BTN3A1O00481 513 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 TGM5O43548 720 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 CLTBP09497 229 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 OGNP20774 298 aaKnown RBP10.52□□□□□ -0.73
TPM1-210ENST00000558264 AGTR2P50052 363 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 THOP1P52888 689 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 MTA1Q13330 715 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 PGM2L1Q6PCE3 622 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 NCEH1Q6PIU2 408 aa10.52□□□□□ -0.73
TPM1-210ENST00000558264 LAYNQ6UX15 382 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms