RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CMKLR1Q99788 373 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 RBM22Q9NW64 420 aaKnown RBP eCLIP14.59□□□□□ -0.071e-9■■■■□ 20
SHMT2-235ENST00000557740 AKAP7Q9P0M2 348 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-235ENST00000557740 AMACRQ9UHK6 382 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 SLC17A4Q9Y2C5 497 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 PPIL1Q9Y3C6 166 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 KIF26BQ2KJY2 2108 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 GCN1Q92616 2671 aaKnown RBP14.58□□□□□ -0.08
SHMT2-235ENST00000557740 A0A0J9YYE9 177 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 A0A0U1RQS6 177 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 CAPN8A6NHC0 703 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 K7ENP7 123 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 KALRNO60229 2985 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 FZD6O60353 706 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 TRBC1P01850 177 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 FGF1P05230 155 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 PYGLP06737 847 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 MX2P20592 715 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 CCNCP24863 283 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 ALDH4A1P30038 563 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 ADCY8P40145 1251 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 ACTR1BP42025 376 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 POLD2P49005 469 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 ACTR1AP61163 376 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 CTBSQ01459 385 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 CFHR1Q03591 330 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 ZFP36L1Q07352 338 aaKnown RBP14.58□□□□□ -0.08
SHMT2-235ENST00000557740 ATP13A4Q4VNC1 1196 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 INO80CQ6PI98 192 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-235ENST00000557740 ZNF765Q7L2R6 523 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 CPNE8Q86YQ8 564 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 SLITRK4Q8IW52 837 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 LPCAT1Q8NF37 534 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 PTCD2Q8WV60 388 aaKnown RBP14.58□□□□□ -0.08
SHMT2-235ENST00000557740 SNRNP27Q8WVK2 155 aaKnown RBP14.58□□□□□ -0.08
SHMT2-235ENST00000557740 WBP1Q96G27 269 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 CCNL2Q96S94 520 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-235ENST00000557740 TDRD1Q9BXT4 1180 aaKnown RBP14.58□□□□□ -0.08
SHMT2-235ENST00000557740 ABCG8Q9H221 673 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 DEF6Q9H4E7 631 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 NENFQ9UMX5 172 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 CHKBQ9Y259 395 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 SHROOM3Q8TF72 1996 aa14.58□□□□□ -0.08
SHMT2-235ENST00000557740 HELZ2Q9BYK8 2649 aaKnown RBP14.57□□□□□ -0.08
SHMT2-235ENST00000557740 MGAQ8IWI9 3026 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 NVLO15381 856 aaKnown RBP14.57□□□□□ -0.08
SHMT2-235ENST00000557740 ECEL1O95672 775 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 CPNE6O95741 557 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 FUCA1P04066 466 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 ITIH1P19827 911 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 HNRNPH3P31942 346 aaKnown RBP14.57□□□□□ -0.08
SHMT2-235ENST00000557740 STC1P52823 247 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 OR1D5P58170 312 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 TAS2R40P59535 323 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 RPL26P61254 145 aaKnown RBP14.57□□□□□ -0.08
SHMT2-235ENST00000557740 B4GALNT1Q00973 533 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 TRIM14Q14142 442 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 SLC18A3Q16572 532 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 PCSK4Q6UW60 755 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 RFLNAQ6ZTI6 216 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 ZNF438Q7Z4V0 828 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 TRIM74Q86UV6 250 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 PIM3Q86V86 326 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 GALNT13Q8IUC8 556 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 ZNF843Q8N446 348 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 CCNYQ8ND76 341 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 SCAMP4Q969E2 229 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 FATE1Q969F0 183 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 TSGA13Q96PP4 275 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 SMIM14Q96QK8 99 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 PACSIN1Q9BY11 444 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 XPO4Q9C0E2 1151 aaKnown RBP14.57□□□□□ -0.08
SHMT2-235ENST00000557740 ZMYND15Q9H091 742 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 RDH14Q9HBH5 336 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 ZNHIT6Q9NWK9 470 aaKnown RBP14.57□□□□□ -0.08
SHMT2-235ENST00000557740 SEPT10Q9P0V9 454 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 ACSL6Q9UKU0 697 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 RPL26L1Q9UNX3 145 aaKnown RBP14.57□□□□□ -0.08
SHMT2-235ENST00000557740 TMEM98Q9Y2Y6 226 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 ZNF462Q96JM2 2506 aa14.57□□□□□ -0.08
SHMT2-235ENST00000557740 PRAMEF33A0A0G2JMD5 474 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 PRAMEF10O60809 474 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 SOD1P00441 154 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 HLA-DQB2P05538 268 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 LIPCP11150 499 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 PTMSP20962 102 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 MAN1A1P33908 653 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 MAPK10P53779 464 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 PTSQ03393 145 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 GBE1Q04446 702 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 LRP8Q14114 963 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 CLPPQ16740 277 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-235ENST00000557740 KIAA1614Q5VZ46 1190 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 MARK2Q7KZI7 788 aaKnown RBP14.56□□□□□ -0.08
SHMT2-235ENST00000557740 TMPRSS9Q7Z410 1059 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 C17orf82Q86X59 251 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-235ENST00000557740 CCDC13Q8IYE1 715 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 NRSN1Q8IZ57 195 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 PQLC3Q8N755 202 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms