RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 FZD6O60353 706 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 PDHA1P08559 390 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 FAM87AP0C7U9 286 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 SFTPCP11686 197 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 CTPS1P17812 591 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 MMP13P45452 471 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 KLHL30Q0D2K2 578 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 PEX6Q13608 980 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 SMTNL2Q2TAL5 461 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 ARMC12Q5T9G4 340 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 NKAIN2Q5VXU1 208 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 TXNRD3NBQ6F5E7 133 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 ADAMTSL4Q6UY14 1074 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 NLRP8Q86W28 1048 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 TEX26Q8N6G2 289 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 OR4D9Q8NGE8 314 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 HSPH1Q92598 858 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 NKD1Q969G9 470 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 PMEPA1Q969W9 287 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 TRIM11Q96F44 468 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.89■□□□□ 0.13
SCFD1-224ENST00000557713 TMEM98Q9Y2Y6 226 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 GOLGA6CA6NDK9 693 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 GOLGA6BA6NDN3 693 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 STMND1H3BQB6 276 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 GOLGA6DP0CG33 693 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 SKILP12757 684 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 IL4RP24394 825 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 GPR1P46091 355 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 CSRP3P50461 194 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 PTSQ03393 145 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 TYRO3Q06418 890 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 PYCR3Q53H96 274 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 DOK6Q6PKX4 331 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 USP45Q70EL2 814 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 ATPAF2Q8N5M1 289 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 NSMCE1Q8WV22 266 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 TEKT4Q8WW24 435 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 JPH3Q8WXH2 748 aaPredicted RBP15.88■□□□□ 0.13
SCFD1-224ENST00000557713 SCAMP4Q969E2 229 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 SMIM14Q96QK8 99 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 FUCA2Q9BTY2 467 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 SLC12A9Q9BXP2 914 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 PCDH18Q9HCL0 1135 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 GOLGA6AQ9NYA3 693 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 IL17BQ9UHF5 180 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 CD84Q9UIB8 345 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 BOD1L1Q8NFC6 3051 aa15.88■□□□□ 0.13
SCFD1-224ENST00000557713 BSNQ9UPA5 3926 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 CYSRT1A8MQ03 144 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 TERTO14746 1132 aaKnown RBP15.87■□□□□ 0.13
SCFD1-224ENST00000557713 SUV39H1O43463 412 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 CSF2RBP32927 897 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 SERPINB6P35237 376 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 ACTR1BP42025 376 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 ACTR1AP61163 376 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 NFKB2Q00653 900 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 BIRC2Q13490 618 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 PIGHQ14442 188 aaPredicted RBP15.87■□□□□ 0.13
SCFD1-224ENST00000557713 IHHQ14623 411 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 CLCA4Q14CN2 919 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 CCDC183Q5T5S1 534 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 LRRC66Q68CR7 880 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 ZNF765Q7L2R6 523 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 LRRC49Q8IUZ0 686 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 AGBL5Q8NDL9 886 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 AP2M1Q96CW1 435 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 NAP1L5Q96NT1 182 aaPredicted RBP15.87■□□□□ 0.13
SCFD1-224ENST00000557713 GBP4Q96PP9 640 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 OR2M4Q96R27 311 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 AGAP2Q99490 1192 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 DPYSL5Q9BPU6 564 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 BPIFA3Q9BQP9 254 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 CDH19Q9H159 772 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 NT5MQ9NPB1 228 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 TMEM9Q9P0T7 183 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 PDP2Q9P2J9 529 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 B3GALT1Q9Y5Z6 326 aa15.87■□□□□ 0.13
SCFD1-224ENST00000557713 A0A0J9YYE9 177 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 TRBC1P01850 177 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 THRAP10827 490 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 ZNF30P17039 623 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 MPSTP25325 297 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 FASLGP48023 281 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 SLC25A11Q02978 314 aaKnown RBP15.86■□□□□ 0.13
SCFD1-224ENST00000557713 ANO6Q4KMQ2 910 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 TMEM71Q6P5X7 295 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 ATG14Q6ZNE5 492 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 TRIM74Q86UV6 250 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 NDUFAF2Q8N183 169 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 NIPA2Q8N8Q9 360 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 FAM71BQ8TC56 605 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 ART4Q93070 314 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 COX14Q96I36 57 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 DDA1Q9BW61 102 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 TRIM4Q9C037 500 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 NAT10Q9H0A0 1025 aaKnown RBP15.86■□□□□ 0.13
SCFD1-224ENST00000557713 GEMIN8Q9NWZ8 242 aaKnown RBP15.86■□□□□ 0.13
SCFD1-224ENST00000557713 OCIAD1Q9NX40 245 aa15.86■□□□□ 0.13
SCFD1-224ENST00000557713 KCNK4Q9NYG8 393 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms