RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 MTSS1LQ765P7 747 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 TAS2R42Q7RTR8 314 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 SNX20Q7Z614 316 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 GRIN3AQ8TCU5 1115 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 ZNF398Q8TD17 642 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 EID2BQ96D98 161 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 C7orf26Q96N11 449 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 NECTIN4Q96NY8 510 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 MRPL57Q9BQC6 102 aaKnown RBP12.44□□□□□ -0.42
SHMT2-233ENST00000557529 BRD9Q9H8M2 597 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 THAP1Q9NVV9 213 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 ZNF358Q9NW07 568 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 CLDND1Q9NY35 253 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 KLHL14Q9P2G3 628 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 WASF2Q9Y6W5 498 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 ATXN2Q99700 1313 aaKnown RBP12.44□□□□□ -0.42
SHMT2-233ENST00000557529 TMEM265A0A087WTH1 108 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 GLYATL1P3A0A0U1RQE8 302 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 EDDM13A0A1B0GTR0 161 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 UBA6A0AVT1 1052 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 OTOL1A6NHN0 477 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PRRT4C9JH25 899 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 SNNO75324 88 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 LEFTY1O75610 366 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 SRP72O76094 671 aaKnown RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 WISP3O95389 354 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PRNPP04156 253 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PYGLP06737 847 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 RBP1P09455 135 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 RALBP11234 206 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ZNF30P17039 623 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 CD9P21926 228 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 GMPRP36959 345 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 SPAM1P38567 509 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PTGER3P43115 390 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ADARP55265 1226 aaKnown RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 CDKN2DP55273 166 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 HNRNPH2P55795 449 aaKnown RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 KDSRQ06136 332 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ASPHQ12797 758 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 GRM2Q14416 872 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ZNF460Q14592 562 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 E2F5Q15329 346 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 HNRNPA1L2Q32P51 320 aaKnown RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ITPRIPL2Q3MIP1 535 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 GPR33Q49SQ1 333 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 FNDC3BQ53EP0 1204 aaKnown RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ZNF805Q5CZA5 627 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ARSIQ5FYB1 569 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 LRRC8EQ6NSJ5 796 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 CGB2Q6NT52 195 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PSAPL1Q6NUJ1 521 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ZNF549Q6P9A3 640 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 C6orf89Q6UWU4 347 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ZYG11AQ6WRX3 759 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 C10orf107Q8IVU9 208 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PIANPQ8IYJ0 282 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PHTF2Q8N3S3 785 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 TERB1Q8NA31 727 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 MYLIPQ8WY64 445 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 NXPE3Q969Y0 559 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PBXIP1Q96AQ6 731 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 NXNL1Q96CM4 212 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 UBXN10Q96LJ8 280 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 GPR78Q96P69 363 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 KXD1Q9BQD3 176 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 TRIM55Q9BYV6 548 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 MRPL46Q9H2W6 279 aaKnown RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 SYTL2Q9HCH5 934 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 RAD18Q9NS91 495 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 TAS2R13Q9NYV9 303 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 KIF26AQ9ULI4 1882 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 TRANK1O15050 2925 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 TBC1D3BA6NDS4 549 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 UPK3BL1B0FP48 263 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 UPK3BL2E5RIL1 263 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 G3V2L1 256 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 TRIM13O60858 407 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 RHOBTB1O94844 696 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 KIAA0754O94854 1291 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PRAMEF1O95521 474 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ESR1P03372 595 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PRSS56P0CW18 603 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 CCDC166P0CW27 439 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 FGF3P11487 239 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PKMP14618 531 aaKnown RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 BPIP17213 487 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 KCNA4P22459 653 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 XPAP23025 273 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 GDI1P31150 447 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 FMO4P31512 558 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 GJA4P35212 333 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 OPRD1P41143 372 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 OCRLQ01968 901 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 PDAP1Q13442 181 aaKnown RBP12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ARHGEF7Q14155 803 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 CSHL1Q14406 222 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 COL19A1Q14993 1142 aa12.43□□□□□ -0.42
SHMT2-233ENST00000557529 ACAP2Q15057 778 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms