RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 LRRC59Q96AG4 307 aaKnown RBP4.75□□□□□ -1.65
PRPF39-212ENST00000557477 ELMOD3Q96FG2 381 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 CALML4Q96GE6 196 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 PPP1R13BQ96KQ4 1090 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 GFM1Q96RP9 751 aaKnown RBP4.75□□□□□ -1.65
PRPF39-212ENST00000557477 ISCUQ9H1K1 167 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 SMARCAD1Q9H4L7 1026 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 PDZD7Q9H5P4 517 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 RANGRFQ9HD47 186 aaPredicted RBP4.75□□□□□ -1.65
PRPF39-212ENST00000557477 NFE2L3Q9Y4A8 694 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 CEPT1Q9Y6K0 416 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 TET3O43151 1660 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 ABCC5O15440 1437 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 LY6G6EA0A0G2JKS1 128 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 A0A1W2PQ09 198 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 WDR91A4D1P6 747 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 KDM4EB2RXH2 506 aaPredicted RBP4.74□□□□□ -1.65
PRPF39-212ENST00000557477 TSPAN9O75954 239 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 PGM3O95394 542 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 RB1P06400 928 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 AKR1B1P15121 316 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 GNLYP22749 145 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 MYF6P23409 242 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 GCH1P30793 250 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 DEKP35659 375 aaKnown RBP4.74□□□□□ -1.65
PRPF39-212ENST00000557477 PIGAP37287 484 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 ME1P48163 572 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 RFX5P48382 616 aaPredicted RBP4.74□□□□□ -1.65
PRPF39-212ENST00000557477 COMPP49747 757 aaPredicted RBP4.74□□□□□ -1.65
PRPF39-212ENST00000557477 RASSF2P50749 326 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 C21orf58P58505 322 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 PRAMEP78395 509 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 TRAF1Q13077 416 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 NAE1Q13564 534 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 MYBPC2Q14324 1141 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 GPR18Q14330 331 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 SHBQ15464 509 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 MMEL1Q495T6 779 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 CDONQ4KMG0 1287 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 MANEAQ5SRI9 462 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 DCAF12L2Q5VW00 463 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 ANKRD54Q6NXT1 300 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 GLDNQ6ZMI3 551 aaPredicted RBP4.74□□□□□ -1.65
PRPF39-212ENST00000557477 GALNT5Q7Z7M9 940 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 NRACQ8N912 160 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 C7orf57Q8NEG2 295 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 BEST2Q8NFU1 509 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 LPAR1Q92633 364 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 SLC25A28Q96A46 364 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 SLC41A2Q96JW4 573 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 SLITRK1Q96PX8 696 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 FAM110AQ9BQ89 295 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 TMEM47Q9BQJ4 181 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 CLK4Q9HAZ1 481 aaKnown RBP4.74□□□□□ -1.65
PRPF39-212ENST00000557477 KRCC1Q9NPI7 259 aaPredicted RBP4.74□□□□□ -1.65
PRPF39-212ENST00000557477 PLSCR4Q9NRQ2 329 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 MTMR6Q9Y217 621 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 SESN1Q9Y6P5 492 aa4.74□□□□□ -1.65
PRPF39-212ENST00000557477 RPRD2Q5VT52 1461 aaKnown RBP4.74□□□□□ -1.65
PRPF39-212ENST00000557477 ZFYVE9O95405 1425 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 LMTK2Q8IWU2 1503 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 IGLV5-39A0A0G2JS06 123 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 TMEM202A6NGA9 273 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 HCRTR2O43614 444 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 SLC25A12O75746 678 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 STARD3NLO95772 234 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 HSP90AA1P07900 732 aaKnown RBP4.73□□□□□ -1.65
PRPF39-212ENST00000557477 CYC1P08574 325 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 ZNF182P17025 639 aaPredicted RBP4.73□□□□□ -1.65
PRPF39-212ENST00000557477 PMS2P54278 862 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 EPS8Q12929 822 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 PRTGQ2VWP7 1150 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 USP41Q3LFD5 358 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 COLEC12Q5KU26 742 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 C6orf141Q5SZD1 244 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 JADE1Q6IE81 842 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 Q6ZTK2 550 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 MTSS1LQ765P7 747 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 LINGO2Q7L985 606 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 ZNF367Q7RTV3 350 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 PATL1Q86TB9 770 aaKnown RBP4.73□□□□□ -1.65
PRPF39-212ENST00000557477 PALB2Q86YC2 1186 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 OR8H2Q8N162 312 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 OR14L1PQ8NHC6 308 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 DENND1AQ8TEH3 1009 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 RPL36ALQ969Q0 106 aaKnown RBP4.73□□□□□ -1.65
PRPF39-212ENST00000557477 ERP27Q96DN0 273 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 URB1-AS1Q96HZ7 61 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 NLRP4Q96MN2 994 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 ZNF570Q96NI8 536 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 SERINC2Q96SA4 455 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 SRSF8Q9BRL6 282 aaKnown RBP4.73□□□□□ -1.65
PRPF39-212ENST00000557477 MAK16Q9BXY0 300 aaKnown RBP4.73□□□□□ -1.65
PRPF39-212ENST00000557477 FOXP1Q9H334 677 aaPredicted RBP4.73□□□□□ -1.65
PRPF39-212ENST00000557477 ESRP2Q9H6T0 727 aaKnown RBP4.73□□□□□ -1.65
PRPF39-212ENST00000557477 SLC28A3Q9HAS3 691 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 SETD4Q9NVD3 440 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 TMEM51Q9NW97 253 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 FBXL17Q9UF56 701 aa4.73□□□□□ -1.65
PRPF39-212ENST00000557477 POLG2Q9UHN1 485 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms