RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 CKAP2Q8WWK9 683 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 SCG3Q8WXD2 468 aaKnown RBP10.8□□□□□ -0.68
LINC01550-206ENST00000556462 OR8D1Q8WZ84 308 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 HLA-CQ95604 372 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 FAM111AQ96PZ2 611 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 TCF12Q99081 682 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 NDNQ99608 321 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 FAM96AQ9H5X1 160 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 PCDH12Q9NPG4 1184 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 HEBP1Q9NRV9 189 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 SUN2Q9UH99 717 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 FNDC3AQ9Y2H6 1198 aaKnown RBP10.8□□□□□ -0.68
LINC01550-206ENST00000556462 STON1Q9Y6Q2 735 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 TICRRQ7Z2Z1 1910 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 A0A096LPK6 155 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 KPNA3O00505 521 aaPredicted RBP10.8□□□□□ -0.68
LINC01550-206ENST00000556462 PHGDHO43175 533 aaKnown RBP10.8□□□□□ -0.68
LINC01550-206ENST00000556462 SRP72O76094 671 aaKnown RBP10.8□□□□□ -0.68
LINC01550-206ENST00000556462 MPOP05164 745 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 ASGR2P07307 311 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 C1SP09871 688 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 SAT1P21673 171 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 PMLP29590 882 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 CA5AP35218 305 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 CLCN5P51795 746 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 SEC24CP53992 1094 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 POU4F1Q01851 419 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 INSCQ1MX18 579 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 ZRANB3Q5FWF4 1079 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 PRPF38BQ5VTL8 546 aaKnown RBP10.8□□□□□ -0.68
LINC01550-206ENST00000556462 RFLNAQ6ZTI6 216 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 CLEC14AQ86T13 490 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 CHPFQ8IZ52 775 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 PLD6Q8N2A8 252 aaKnown RBP10.8□□□□□ -0.68
LINC01550-206ENST00000556462 ZNF513Q8N8E2 541 aaPredicted RBP10.8□□□□□ -0.68
LINC01550-206ENST00000556462 GPATCH11Q8N954 259 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 ELMO2Q96JJ3 720 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 OLFM1Q99784 485 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 VPS11Q9H270 941 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 INTS10Q9NVR2 710 aaKnown RBP10.8□□□□□ -0.68
LINC01550-206ENST00000556462 DCDC2Q9UHG0 476 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 APPL1Q9UKG1 709 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 EMCNQ9ULC0 261 aa10.8□□□□□ -0.68
LINC01550-206ENST00000556462 MYO10Q9HD67 2058 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 SLC35E2BP0CK96 405 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 ZNF30P17039 623 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 VIPR1P32241 457 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 WASP42768 502 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 RAB10P61026 200 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 IRF9Q00978 393 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 TIAL1Q01085 375 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC01550-206ENST00000556462 CACNG1Q06432 222 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 RALGDSQ12967 914 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 ZNF460Q14592 562 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 TMEM196Q5HYL7 178 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 HECTD2Q5U5R9 776 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 GPR153Q6NV75 609 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 FAM151BQ6UXP7 276 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 RALGPS2Q86X27 583 aaPredicted RBP10.79□□□□□ -0.68
LINC01550-206ENST00000556462 SPNS2Q8IVW8 549 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 LPGAT1Q92604 370 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 PBXIP1Q96AQ6 731 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 ARRDC3Q96B67 414 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 CABS1Q96KC9 395 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 ZNF317Q96PQ6 595 aaPredicted RBP10.79□□□□□ -0.68
LINC01550-206ENST00000556462 PAIP2Q9BPZ3 127 aaKnown RBP10.79□□□□□ -0.68
LINC01550-206ENST00000556462 ZNF358Q9NW07 568 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.79□□□□□ -0.68
LINC01550-206ENST00000556462 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.79□□□□□ -0.68
LINC01550-206ENST00000556462 VWA7Q9Y334 891 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 SLC30A1Q9Y6M5 507 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 PIAS3Q9Y6X2 628 aa10.79□□□□□ -0.68
LINC01550-206ENST00000556462 TRBV5-4A0A0C4DH59 114 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 SHISA7A6NL88 538 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 SRRM3A6NNA2 597 aaPredicted RBP10.78□□□□□ -0.68
LINC01550-206ENST00000556462 AGAP14A8MT82 685 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 NPC1O15118 1278 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 SPINT1O43278 529 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 OR1I1O60431 355 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 GLRA3O75311 464 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 PRAMEF1O95521 474 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 IL1BP01584 269 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 CYP2A6P11509 494 aaPredicted RBP10.78□□□□□ -0.68
LINC01550-206ENST00000556462 FOSL2P15408 326 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 STMN1P16949 149 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 UGT1A6P19224 532 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 UGT1A1P22309 533 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 UGT1A4P22310 534 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 ITGB7P26010 798 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 UGT1A3P35503 534 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 UGT1A5P35504 534 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 TIE1P35590 1138 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 SPAM1P38567 509 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 SPINT3P49223 89 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 TTPAP49638 278 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 PTPN5P54829 565 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 CDKN2DP55273 166 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 IL9RQ01113 521 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 NFATC2Q13469 925 aa10.78□□□□□ -0.68
LINC01550-206ENST00000556462 PON2Q15165 354 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms