RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ATP5OP48047 213 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 SRP54P61011 504 aaKnown RBP11.51□□□□□ -0.57
SLIRP-205ENST00000556310 DAB2P98082 770 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
SLIRP-205ENST00000556310 PTSQ03393 145 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 CDK18Q07002 472 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 GALNT3Q14435 633 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 SMAD1Q15797 465 aaKnown RBP11.51□□□□□ -0.57
SLIRP-205ENST00000556310 CCDC157Q569K6 752 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 FAM182AQ5T1J6 154 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 RAET1GQ6H3X3 334 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 AADACL2Q6P093 401 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 HEATR4Q86WZ0 1026 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 HID1Q8IV36 788 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 CDKL3Q8IVW4 592 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-205ENST00000556310 ZNF567Q8N184 647 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 GALNT15Q8N3T1 639 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 OR56A4Q8NGH8 313 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 SPATA22Q8NHS9 363 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 UBE2Q2Q8WVN8 375 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 OR1E3Q8WZA6 343 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 TSACCQ96A04 125 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-205ENST00000556310 AP2M1Q96CW1 435 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 HES6Q96HZ4 224 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 APOLD1Q96LR9 279 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 FERMT1Q9BQL6 677 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 MLPHQ9BV36 600 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-205ENST00000556310 TEX101Q9BY14 249 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 FGF22Q9HCT0 170 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 EVA1BQ9NVM1 165 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 NCKIPSDQ9NZQ3 722 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 TRHDEQ9UKU6 1024 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 PACSIN2Q9UNF0 486 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-205ENST00000556310 ASPMQ8IZT6 3477 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 LY6G6EA0A0G2JKS1 128 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 A0A0U1RQS6 177 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 GOLGA6CA6NDK9 693 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 GOLGA6BA6NDN3 693 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 TMEM202A6NGA9 273 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 DDX3YO15523 660 aaKnown RBP11.5□□□□□ -0.57
SLIRP-205ENST00000556310 NRDCO43847 1150 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 PMPCBO75439 489 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 GCATO75600 419 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 ZNF189O75820 626 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CLDN7O95471 211 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 NDST3O95803 873 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 SOD1P00441 154 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 ANXA6P08133 673 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CCDC175P0C221 793 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 GOLGA6DP0CG33 693 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 RBP3P10745 1247 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 RBL1P28749 1068 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 EIF3EP60228 445 aaKnown RBP11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CCZ1BP86790 482 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CCZ1P86791 482 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CDK3Q00526 305 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 ELOCQ15369 112 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 PCSK7Q16549 785 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CDKN3Q16667 212 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 TUSC1Q2TAM9 212 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 DEFB133Q30KQ1 61 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 KCTD16Q68DU8 428 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 KDELC1Q6UW63 502 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 DHRS13Q6UX07 377 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 ADAMTSL4Q6UY14 1074 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 ZNF662Q6ZS27 426 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 RFLNAQ6ZTI6 216 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 TMPRSS7Q7RTY8 843 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 NLRP8Q86W28 1048 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 LRRC8AQ8IWT6 810 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 NRSN1Q8IZ57 195 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 SDR16C5Q8N3Y7 309 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CCHCR1Q8TD31 782 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 GATA6Q92908 595 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CNTNAP3BQ96NU0 1288 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 FCRL5Q96RD9 977 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 LGR4Q9BXB1 951 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 FRMD8Q9BZ67 464 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CNTNAP3Q9BZ76 1288 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CLPBQ9H078 707 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 ABCG8Q9H221 673 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 GRPEL1Q9HAV7 217 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 GOLGA6AQ9NYA3 693 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 PKD2L2Q9NZM6 624 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 FAM153AQ9UHL3 310 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 CD84Q9UIB8 345 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 GUCA1BQ9UMX6 200 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 U3KQA8 63 aa11.5□□□□□ -0.57
SLIRP-205ENST00000556310 ZFC3H1O60293 1989 aaKnown RBP11.5□□□□□ -0.57
SLIRP-205ENST00000556310 ZNF106Q9H2Y7 1883 aaKnown RBP11.49□□□□□ -0.57
SLIRP-205ENST00000556310 MYLKQ15746 1914 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 PRSS38A1L453 326 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 RGSL1A5PLK6 1076 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 GOLGA6L9A6NEM1 432 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 TNFP01375 233 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 PTMAP06454 111 aaKnown RBP11.49□□□□□ -0.57
SLIRP-205ENST00000556310 CELA2BP08218 269 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-205ENST00000556310 CTSEP14091 401 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 GPR1P46091 355 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms